RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 PPP4R1Q8TF05 950 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 HASPINQ8TF76 798 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TRUB1Q8WWH5 349 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PRPF31Q8WWY3 499 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RSAD2Q8WXG1 361 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 JPH3Q8WXH2 748 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 STARD8Q92502 1023 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TFAP2CQ92754 450 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 LPPQ93052 612 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TMIGD2Q96BF3 282 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CCDC127Q96BQ5 260 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 C12orf43Q96C57 262 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 FAF2Q96CS3 445 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ASB9Q96DX5 294 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PLEKHA8Q96JA3 519 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 FEM1CQ96JP0 617 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CEP170P1Q96L14 293 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CNBD2Q96M20 576 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF512Q96ME7 567 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 COG8Q96MW5 612 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RILPQ96NA2 401 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 KLHL32Q96NJ5 620 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CGRRF1Q99675 332 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 EBNA1BP2Q99848 306 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CTRCQ99895 268 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 FERMT1Q9BQL6 677 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GPATCH1Q9BRR8 931 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PI4K2AQ9BTU6 479 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MROQ9BYG7 248 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 YTHDF1Q9BYJ9 559 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 LHX5Q9H2C1 402 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CCDC68Q9H2F9 335 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RPF2Q9H7B2 306 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF703Q9H7S9 590 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 C10orf88Q9H8K7 445 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CLK4Q9HAZ1 481 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MAGEE1Q9HCI5 957 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MRPL40Q9NQ50 206 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 EIF2B3Q9NR50 452 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MRGBPQ9NV56 204 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 KLHL11Q9NVR0 708 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 DUS2Q9NX74 493 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MTMR10Q9NXD2 777 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NCKIPSDQ9NZQ3 722 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SELENONQ9NZV5 590 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 KCMF1Q9P0J7 381 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 LUZP4Q9P127 313 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 COPG2Q9UBF2 871 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MARCOQ9UEW3 520 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ADAM28Q9UKQ2 775 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 AP4S1Q9Y587 144 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 HEY1Q9Y5J3 304 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NOTCH4Q99466 2003 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 DENND4CQ5VZ89 1909 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TTC3P53804 2025 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ANAPC1Q9H1A4 1944 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 MTCL1Q9Y4B5 1905 aaKnown RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 A0A087WZ62 844 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 VSTM5A8MXK1 200 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 G3V2L1 256 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 PSMD12O00232 456 aaPredicted RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 RNF103O00237 685 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 TRIM38O00635 465 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 DLGAP1O14490 977 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 TRIM24O15164 1050 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC22A1O15245 554 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 PAPSS1O43252 624 aaPredicted RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 HTRA2O43464 458 aaPredicted RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 DCXO43602 365 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 MGEA5O60502 916 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 UGT1A9O60656 530 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 KPNA6O60684 536 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 LYPLA1O75608 230 aaPredicted RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 VAPBO95292 243 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 C22orf31O95567 290 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ZBTB11O95625 1053 aaPredicted RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ASS1P00966 412 aaKnown RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 UGT2B4P06133 528 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ALOX5P09917 674 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 OCM2P0CE71 109 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 OCMP0CE72 109 aaPredicted RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 RALBP11234 206 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 HNRNPLP14866 589 aaKnown RBP eCLIP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 BPIP17213 487 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 UGT1A6P19224 532 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 TGM2P21980 687 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 CDH3P22223 829 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 UGT1A1P22309 533 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 UGT1A4P22310 534 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ME2P23368 584 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 KDELR1P24390 212 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC7A1P30825 629 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 UGT1A3P35503 534 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 UGT1A5P35504 534 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 MSX2P35548 267 aaPredicted RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 RPS19P39019 145 aaKnown RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 PBX3P40426 434 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 DPP6P42658 865 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 QARSP47897 775 aaKnown RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ERFP50548 548 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms