RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 IL18R1Q13478 541 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 PTPN20Q4JDL3 420 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 MAB21L3Q8N8X9 362 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 SLC2A11Q9BYW1 496 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 FAM83DQ9H4H8 585 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 ANKRA2Q9H9E1 313 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 RC3H2Q9HBD1 1191 aaKnown RBP8.74□□□□□ -1.01
LSAMP-205ENST00000490035 USP29Q9HBJ7 922 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 C1orf109Q9NX04 203 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 CDC14AQ9UNH5 594 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 TLR6Q9Y2C9 796 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 UBR2Q8IWV8 1755 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 GJB6O95452 261 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 CXCL14O95715 111 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 PGRP06401 933 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 C8BP07358 591 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 ACADVLP49748 655 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 ADAM8P78325 824 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 DPYSL2Q16555 572 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 TAF8Q7Z7C8 310 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 TNFAIP8L1Q8WVP5 186 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 TLCD1Q96CP7 247 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 TUBA1CQ9BQE3 449 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 SPATA7Q9P0W8 599 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 R3HDM2Q9Y2K5 976 aaKnown RBP8.74□□□□□ -1.01
LSAMP-205ENST00000490035 NPEPPSL1A6NEC2 478 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 CCNKO75909 580 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 PPIGQ13427 754 aaKnown RBP eCLIP8.74□□□□□ -1.01
LSAMP-205ENST00000490035 REP15Q6BDI9 236 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 SLITRK4Q8IW52 837 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 OR5K1Q8NHB7 308 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 RBM18Q96H35 190 aaKnown RBP8.74□□□□□ -1.01
LSAMP-205ENST00000490035 PCDHB16Q9NRJ7 776 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 TRIM17Q9Y577 477 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 PCDHGA2Q9Y5H1 932 aa8.74□□□□□ -1.01
LSAMP-205ENST00000490035 RLN2P04090 185 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ENDOUP21128 410 aaKnown RBP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ITPKBP27987 946 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 USP4Q13107 963 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TIGD2Q4W5G0 525 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ABHD13Q7L211 337 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 NPAS2Q99743 824 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ZNF446Q9NWS9 450 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 SLC45A1Q9Y2W3 748 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ANXA4P09525 319 aaPredicted RBP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ZNF3P17036 446 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ITGB5P18084 799 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TRAM1Q15629 374 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TSTD2Q5T7W7 516 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 BTN2A1Q7KYR7 527 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 RBM15BQ8NDT2 890 aaKnown RBP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TAPBPLQ9BX59 468 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 MKLN1Q9UL63 735 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 BTRCQ9Y297 605 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TLL1O43897 1013 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 AIREO43918 545 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 PSIP1O75475 530 aaKnown RBP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TACR2P21452 398 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 SLC6A4P31645 630 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 HERVK_113P63132 956 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ZBTB6Q15916 424 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 KBTBD2Q8IY47 623 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 C4orf32Q8N8J7 132 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 C12orf29Q8N999 325 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 PNLDC1Q8NA58 520 aaKnown RBP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 DNASE1L2Q92874 299 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 GPR20Q99678 358 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ERVK-6Q9BXR3 956 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 NME6O75414 186 aaPredicted RBP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 RENP00797 406 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 BMP6P22004 513 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 GABRR2P28476 465 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 CCR10P46092 362 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ERVK-21P61565 698 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 IL17AQ16552 155 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 FNBP1LQ5T0N5 605 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 LRRC70Q7Z2Q7 622 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ATAD1Q8NBU5 361 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 HCAR2Q8TDS4 363 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TSPEARQ8WU66 669 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 RHBGQ9H310 441 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 TMEM9Q9P0T7 183 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 COQ4Q9Y3A0 265 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 SNX4O95219 450 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 PRAMEF1O95521 474 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 C9P02748 559 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 ARL13AQ5H913 290 aaPredicted RBP8.73□□□□□ -1.01
LSAMP-205ENST00000490035 FRRS1Q6ZNA5 592 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 MCEMP1Q8IX19 187 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 CCDC54Q8NEL0 328 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 OR5B17Q8NGF7 314 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 NEK7Q8TDX7 302 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 CEP295NLQ96MC4 621 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 EGFL7Q9UHF1 273 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 CDH7Q9ULB5 785 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 FZD10Q9ULW2 581 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 SPTLC1O15269 473 aa8.73□□□□□ -1.01
LSAMP-205ENST00000490035 UGT1A3P35503 534 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms