RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 OR1L3Q8NH93 324 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 RAPGEF5Q92565 580 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 C12orf66Q96MD2 445 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 SRPK1Q96SB4 655 aaKnown RBP13.59□□□□□ -0.23
VARS-227ENST00000489979 ZCCHC2Q9C0B9 1178 aaKnown RBP13.59□□□□□ -0.23
VARS-227ENST00000489979 ACTR5Q9H9F9 607 aaPredicted RBP13.59□□□□□ -0.23
VARS-227ENST00000489979 UGT1A7Q9HAW7 530 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 UGT1A10Q9HAW8 530 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 UGT1A8Q9HAW9 530 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 SLC24A2Q9UI40 661 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 SRPK3Q9UPE1 567 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 HEY1Q9Y5J3 304 aa13.59□□□□□ -0.23
VARS-227ENST00000489979 DNMT3AQ9Y6K1 912 aaPredicted RBP13.59□□□□□ -0.23
VARS-227ENST00000489979 PMPCBO75439 489 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 POU3F2P20265 443 aaPredicted RBP13.58□□□□□ -0.24
VARS-227ENST00000489979 CYP2A7P20853 494 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 CDH3P22223 829 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
VARS-227ENST00000489979 HNRNPH3P31942 346 aaKnown RBP13.58□□□□□ -0.24
VARS-227ENST00000489979 OTX2P32243 289 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 HMGCLP35914 325 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 SPAM1P38567 509 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 NOMO1Q15155 1222 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 SLC14A2Q15849 920 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 GPRC6AQ5T6X5 926 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 FAM151BQ6UXP7 276 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 B4GALNT4Q76KP1 1039 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 PLD5Q8N7P1 536 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 BEND7Q8N7W2 519 aaPredicted RBP13.58□□□□□ -0.24
VARS-227ENST00000489979 DDHD1Q8NEL9 900 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
VARS-227ENST00000489979 ZFPM2Q8WW38 1151 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 ILKAPQ9H0C8 392 aaPredicted RBP13.58□□□□□ -0.24
VARS-227ENST00000489979 KIR3DX1Q9H7L2 352 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 GLOD4Q9HC38 313 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 UBP1Q9NZI7 540 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 COPG1Q9Y678 874 aaKnown RBP13.58□□□□□ -0.24
VARS-227ENST00000489979 FER1L5A0AVI2 2057 aa13.58□□□□□ -0.24
VARS-227ENST00000489979 A0A087X0T9 212 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 C9J4A7 227 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 PROSCO94903 275 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 FAM228BP0C875 321 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 HLA-DPA1P20036 260 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 KDELR1P24390 212 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 PREPP48147 710 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 GLRBP48167 497 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 PRKAA1Q13131 559 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 PPP2R5EQ16537 467 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 CRB2Q5IJ48 1285 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 FNBP1LQ5T0N5 605 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 LYPLAL1Q5VWZ2 237 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 ZDHHC20Q5W0Z9 365 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 DET1Q7L5Y6 550 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 OR4E2Q8NGC2 313 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 DTX3LQ8TDB6 740 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 INPP5DQ92835 1189 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 NAP1L5Q96NT1 182 aaPredicted RBP13.57□□□□□ -0.24
VARS-227ENST00000489979 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 SLC7A5P2Q9GIP4 190 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 SYTL2Q9HCH5 934 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 C1GALT1Q9NS00 363 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 IL17CQ9P0M4 197 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 FAM8A1Q9UBU6 413 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 POMT2Q9UKY4 750 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 ACSL5Q9ULC5 683 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 NTNG1Q9Y2I2 539 aa13.57□□□□□ -0.24
VARS-227ENST00000489979 BZW2Q9Y6E2 419 aaKnown RBP13.57□□□□□ -0.24
VARS-227ENST00000489979 GLYATL1P3A0A0U1RQE8 302 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 MGAT4DA6NG13 374 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 LDB2O43679 373 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 KLF7O75840 302 aaPredicted RBP13.56□□□□□ -0.24
VARS-227ENST00000489979 ALPPP05187 535 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 PRF1P14222 555 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 MSH3P20585 1137 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 LMAN1P49257 510 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 GSE1Q14687 1217 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 MYBPC3Q14896 1274 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 PDK1Q15118 436 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 TEX44Q53QW1 395 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 ALKBH5Q6P6C2 394 aaKnown RBP13.56□□□□□ -0.24
VARS-227ENST00000489979 IGFL3Q6UXB1 125 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 NPNTQ6UXI9 565 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 SPOCD1Q6ZMY3 1216 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 MRGPREQ86SM8 312 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 ZGRF1Q86YA3 2104 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 SLC34A3Q8N130 599 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 GALNT16Q8N428 558 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.56□□□□□ -0.24
VARS-227ENST00000489979 NAT14Q8WUY8 206 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 RMDN2Q96LZ7 410 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 FER1L6-AS2Q96M78 137 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 OLFM3Q96PB7 478 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
VARS-227ENST00000489979 DPH2Q9BQC3 489 aaPredicted RBP13.56□□□□□ -0.24
VARS-227ENST00000489979 TRABDQ9H4I3 376 aa13.56□□□□□ -0.24
VARS-227ENST00000489979 ZNF552Q9H707 407 aaPredicted RBP13.56□□□□□ -0.24
VARS-227ENST00000489979 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms