RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 MRPL14Q6P1L8 145 aaKnown RBP14.56□□□□□ -0.08
UFD1-209ENST00000489406 TRIM65Q6PJ69 517 aa14.56□□□□□ -0.08
UFD1-209ENST00000489406 Q6ZPB1 254 aaPredicted RBP14.56□□□□□ -0.08
UFD1-209ENST00000489406 CARFQ8N187 725 aa14.56□□□□□ -0.08
UFD1-209ENST00000489406 ACRBPQ8NEB7 543 aa14.56□□□□□ -0.08
UFD1-209ENST00000489406 AGAP11Q8TF27 550 aa14.56□□□□□ -0.08
UFD1-209ENST00000489406 CPA5Q8WXQ8 436 aa14.56□□□□□ -0.08
UFD1-209ENST00000489406 FAM81BQ96LP2 452 aa14.56□□□□□ -0.08
UFD1-209ENST00000489406 ZNF395Q9H8N7 513 aaPredicted RBP14.56□□□□□ -0.08
UFD1-209ENST00000489406 A0A0J9YYE9 177 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 C17orf113A0A1B0GUU1 675 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 NKX2-6A6NCS4 301 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 FOXN3O00409 490 aaPredicted RBP14.55□□□□□ -0.08
UFD1-209ENST00000489406 ZNHIT1O43257 154 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 PMPCBO75439 489 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 ZNF202O95125 648 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 TRBC1P01850 177 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 RFC1P35251 1148 aaPredicted RBP14.55□□□□□ -0.08
UFD1-209ENST00000489406 NDUFA8P51970 172 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 RPE65Q16518 533 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 TAF3Q5VWG9 929 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 KIRREL2Q6UWL6 708 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 ZNF547Q8IVP9 402 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 TRIM59Q8IWR1 403 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 ARHGAP12Q8IWW6 846 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 MSANTD4Q8NCY6 345 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 PHF10Q8WUB8 498 aaKnown RBP14.55□□□□□ -0.08
UFD1-209ENST00000489406 NACC2Q96BF6 587 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 C1GALT1Q9NS00 363 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 SAMSN1Q9NSI8 373 aaKnown RBP14.55□□□□□ -0.08
UFD1-209ENST00000489406 APEX2Q9UBZ4 518 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 PSMD13Q9UNM6 376 aa14.55□□□□□ -0.08
UFD1-209ENST00000489406 HCFC1P51610 2035 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 POLR2CP19387 275 aaPredicted RBP14.54□□□□□ -0.08
UFD1-209ENST00000489406 SPINT3P49223 89 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 GALNT3Q14435 633 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 TUBB8Q3ZCM7 444 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 ZNF658Q5TYW1 1059 aaPredicted RBP14.54□□□□□ -0.08
UFD1-209ENST00000489406 GPR135Q8IZ08 494 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 TAB3Q8N5C8 712 aaPredicted RBP14.54□□□□□ -0.08
UFD1-209ENST00000489406 HAS2Q92819 552 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 RMND5BQ96G75 393 aaPredicted RBP14.54□□□□□ -0.08
UFD1-209ENST00000489406 AP1M1Q9BXS5 423 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 UCK2Q9BZX2 261 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 PTGFRNQ9P2B2 879 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 DHCR7Q9UBM7 475 aaKnown RBP14.54□□□□□ -0.08
UFD1-209ENST00000489406 FZD10Q9ULW2 581 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 PPT2Q9UMR5 302 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.54□□□□□ -0.08
UFD1-209ENST00000489406 FHOD1Q9Y613 1164 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 HS3ST3B1Q9Y662 390 aa14.54□□□□□ -0.08
UFD1-209ENST00000489406 TLN2Q9Y4G6 2542 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 FAM90A27PA6NNH2 459 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 GPR89AB7ZAQ6 455 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 INAFM1C9JVW0 142 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 FAM227AF5H4B4 570 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 VEGFDO43915 354 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 FZD6O60353 706 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 GADD45BO75293 160 aaPredicted RBP14.53□□□□□ -0.08
UFD1-209ENST00000489406 MTX2O75431 263 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 CTAG2O75638 210 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 HOXD4P09016 255 aaPredicted RBP14.53□□□□□ -0.08
UFD1-209ENST00000489406 MSL3P1P0C860 447 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 GPR89BP0CG08 455 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 ST6GAL1P15907 406 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 SPAM1P38567 509 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 HSPA9P38646 679 aaKnown RBP14.53□□□□□ -0.08
UFD1-209ENST00000489406 EPHB1P54762 984 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 NKAIN1Q4KMZ8 207 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 COBLL1Q53SF7 1204 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 RHBDD2Q6NTF9 364 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 MBD6Q96DN6 1003 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 DMRTA2Q96SC8 542 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 KLHL25Q9H0H3 589 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 IMP3Q9NV31 184 aaKnown RBP14.53□□□□□ -0.08
UFD1-209ENST00000489406 LRFN1Q9P244 771 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 RCOR1Q9UKL0 485 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 EDARQ9UNE0 448 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 CFAP20Q9Y6A4 193 aaKnown RBP14.53□□□□□ -0.08
UFD1-209ENST00000489406 HIVEP2P31629 2446 aa14.53□□□□□ -0.08
UFD1-209ENST00000489406 E9PLN8 166 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 ADAM10O14672 748 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 MAP3K7O43318 606 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 PYGMP11217 842 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 MSX1P28360 303 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 STX17P56962 302 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 PPP2R2BQ00005 443 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 TFF3Q07654 80 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 ZNF569Q5MCW4 686 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 NAA35Q5VZE5 725 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 CAMKMTQ7Z624 323 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 DOLPP1Q86YN1 238 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 FAM20CQ8IXL6 584 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 NPWQ8N729 165 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 PROKR1Q8TCW9 393 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 THAP3Q8WTV1 239 aaPredicted RBP14.52□□□□□ -0.09
UFD1-209ENST00000489406 ZFPM2Q8WW38 1151 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 ZNF599Q96NL3 588 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 VKORC1Q9BQB6 163 aa14.52□□□□□ -0.09
UFD1-209ENST00000489406 MGME1Q9BQP7 344 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms