RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 A0A0J9YYE9 177 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 EEF2KO00418 725 aaKnown RBP8.92□□□□□ -0.98
SSBP1-212ENST00000489378 CHUKO15111 745 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 FZD6O60353 706 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 ZBTB11O95625 1053 aaPredicted RBP8.92□□□□□ -0.98
SSBP1-212ENST00000489378 TRBC1P01850 177 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 IGHEP01854 428 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 THBS1P07996 1170 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 KRT3P12035 628 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 CYP2A7P20853 494 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 ARCN1P48444 511 aaKnown RBP8.92□□□□□ -0.98
SSBP1-212ENST00000489378 IHHQ14623 411 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 PRKD1Q15139 912 aaPredicted RBP8.92□□□□□ -0.98
SSBP1-212ENST00000489378 CA9Q16790 459 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 TMTC4Q5T4D3 741 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 AGAP9Q5VTM2 703 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 MLIPQ5VWP3 458 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 DPY19L2P1Q6NXN4 242 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 TMEM207Q6UWW9 146 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 ADGRG6Q86SQ4 1221 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 ZNF547Q8IVP9 402 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 COG1Q8WTW3 980 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 SLC20A1Q8WUM9 679 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 NR4A3Q92570 626 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 NRGNQ92686 78 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 CCDC34Q96HJ3 373 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 MAGEB10Q96LZ2 347 aaPredicted RBP8.92□□□□□ -0.98
SSBP1-212ENST00000489378 DHRS4Q9BTZ2 278 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 FAM83DQ9H4H8 585 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 MAN1B1Q9UKM7 699 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 BTRCQ9Y297 605 aa8.92□□□□□ -0.98
SSBP1-212ENST00000489378 BICDL2A1A5D9 508 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 GTPBP10A4D1E9 387 aaKnown RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 OR5K3A6NET4 321 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 TMEM150CB9EJG8 249 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 CNOT3O75175 753 aaKnown RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 UNC5CO95185 931 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 IGHA1P01876 353 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 ERCC2P18074 760 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 HTR7P34969 479 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 HSPA9P38646 679 aaKnown RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 FOLR3P41439 243 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 SPINT3P49223 89 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 KPNA2P52292 529 aaKnown RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 CSNK1G2P78368 415 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 PTP4A2Q12974 167 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 AIMP2Q13155 320 aaKnown RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 ZFYVE27Q5T4F4 411 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 AGAP7PQ5VUJ5 663 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 KLHL35Q6PF15 583 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 WASH2PQ6VEQ5 465 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 CREBRFQ8IUR6 639 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 FMR1NBQ8N0W7 255 aaPredicted RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 ACBD4Q8NC06 268 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 GTPBP3Q969Y2 492 aaKnown RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 ZNF599Q96NL3 588 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 AGAP4Q96P64 663 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 TRIM56Q9BRZ2 755 aaKnown RBP8.91□□□□□ -0.98
SSBP1-212ENST00000489378 TIMM29Q9BSF4 260 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 TMEM121Q9BTD3 319 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 TRIM39Q9HCM9 518 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 DLL4Q9NR61 685 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 HRASLS2Q9NWW9 162 aa8.91□□□□□ -0.98
SSBP1-212ENST00000489378 SLC9B1P1A6NJY1 282 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 KMOO15229 486 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 MTX2O75431 263 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 SLC25A14O95258 325 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CLDN14O95500 239 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CYP1A1P04798 512 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 UMODP07911 640 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CBSLP0DN79 551 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CHRNB2P17787 502 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 AGAP20933 346 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 IDSP22304 550 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 MST1P26927 711 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CBSP35520 551 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 ZNF143P52747 638 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 IST1P53990 364 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 AIF1P55008 147 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 LTBQ06643 244 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 FOXD4Q12950 439 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CYP2A13Q16696 494 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 PRAMEF13Q5VWM6 474 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 RPUSD3Q6P087 351 aaKnown RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 MEX3BQ6ZN04 569 aaKnown RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 RIPOR1Q6ZS17 1223 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 RFX8Q6ZV50 586 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 B4GALNT4Q76KP1 1039 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 LRRTM4Q86VH4 590 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 NDUFAF2Q8N183 169 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 OR1N1Q8NGS0 311 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 OR2Y1Q8NGV0 311 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 DPH2Q9BQC3 489 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 SELENOOQ9BVL4 669 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 ENKD1Q9H0I2 346 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CXXC4Q9H2H0 198 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 DHX35Q9H5Z1 703 aaKnown RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 FANCEQ9HB96 536 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 SLC6A20Q9NP91 592 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 NOCTQ9UK39 431 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms