RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 C19orf57Q0VDD7 668 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 GSE1Q14687 1217 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 SIX1Q15475 284 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-206ENST00000489142 DBN1Q16643 649 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 LINC00303Q3SY05 128 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 PPP1R21Q6ZMI0 780 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 PRSS42Q7Z5A4 293 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 LRRC8AQ8IWT6 810 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 HM13Q8TCT9 377 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 ALS2CR12Q96Q35 445 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 ZNF768Q9H5H4 540 aaKnown RBP13.69□□□□□ -0.22
VTI1A-206ENST00000489142 PRSS21Q9Y6M0 314 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 GCN1Q92616 2671 aaKnown RBP13.68□□□□□ -0.22
VTI1A-206ENST00000489142 IGHV5-51A0A0C4DH38 117 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 TRBV5-4A0A0C4DH59 114 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 LOC101059948A0A1B0GTJ6 334 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 CCDC162PA2VCL2 907 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 MROH6A6NGR9 719 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 E7EVH7 732 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 PSMD3O43242 534 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 FAM87AP0C7U9 286 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 PDHA2P29803 388 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 CXCR5P32302 372 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 CACNG1Q06432 222 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 GPR33Q49SQ1 333 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 NAPRTQ6XQN6 538 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 NLGN4XQ8N0W4 816 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 CCDC89Q8N998 374 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 EXD3Q8N9H8 876 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 ZSCAN1Q8NBB4 408 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 LSM14AQ8ND56 463 aaKnown RBP13.68□□□□□ -0.22
VTI1A-206ENST00000489142 NLGN4YQ8NFZ3 816 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-206ENST00000489142 STYXQ8WUJ0 223 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 ZDHHC12Q96GR4 267 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 LINC00615Q96LM1 132 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-206ENST00000489142 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 TEFMQ96QE5 360 aaKnown RBP13.68□□□□□ -0.22
VTI1A-206ENST00000489142 MAP3K3Q99759 626 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 CCM2Q9BSQ5 444 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 ULBP3Q9BZM4 244 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 SPRY4Q9C004 299 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 COG4Q9H9E3 785 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 RAB6BQ9NRW1 208 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 SMARCAL1Q9NZC9 954 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 SLC24A2Q9UI40 661 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 ACSL5Q9ULC5 683 aa13.68□□□□□ -0.22
VTI1A-206ENST00000489142 IGLV3-16A0A075B6K0 115 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 OR6C74A6NCV1 312 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 OR5K3A6NET4 321 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 H7C0S8 307 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 EBLN1P0CF75 366 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 PRKAR1AP10644 381 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 STIP1P31948 543 aaKnown RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 FDFT1P37268 417 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 TERF1P54274 439 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 CDH17Q12864 832 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 KRT33BQ14525 404 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 BRD3Q15059 726 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 TBR1Q16650 682 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 CAPRIN2Q6IMN6 1127 aaKnown RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 LINC00523Q86TU6 105 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 RASGRP3Q8IV61 690 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 GALNT6Q8NCL4 622 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 PHC3Q8NDX5 983 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 OR4E2Q8NGC2 313 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 OR13J1Q8NGT2 312 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 ZNF778Q96MU6 729 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 ZPBPQ9BS86 351 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 SLC12A9Q9BXP2 914 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 FRMD8P1Q9BZ68 369 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 KIR3DX1Q9H7L2 352 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 GPN2Q9H9Y4 310 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 HRASLS2Q9NWW9 162 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 EPHA6Q9UF33 1036 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 IL17BQ9UHF5 180 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 TMEM184BQ9Y519 407 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 MRPS18BQ9Y676 258 aaKnown RBP13.67□□□□□ -0.22
VTI1A-206ENST00000489142 BOD1L1Q8NFC6 3051 aa13.67□□□□□ -0.22
VTI1A-206ENST00000489142 UBA6A0AVT1 1052 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-206ENST00000489142 TOX3O15405 576 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-206ENST00000489142 CEP104O60308 925 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 KIAA0754O94854 1291 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 SUN1O94901 812 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 TIAF1O95411 115 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 DLGAP3O95886 979 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 FGGP02679 453 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 APRTP07741 180 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 FOLR1P15328 257 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 NELFEP18615 380 aaKnown RBP13.66□□□□□ -0.22
VTI1A-206ENST00000489142 POLR2CP19387 275 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-206ENST00000489142 FOXN2P32314 431 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 RPL22P35268 128 aaKnown RBP13.66□□□□□ -0.22
VTI1A-206ENST00000489142 KCNJ1P48048 391 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 CRADDP78560 199 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 SEMA5AQ13591 1074 aa13.66□□□□□ -0.22
VTI1A-206ENST00000489142 ZNF658BQ4V348 819 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms