RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 PPP1R36Q96LQ0 422 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PPP3R2Q96LZ3 170 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CDRT15Q96T59 188 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 HEPHQ9BQS7 1158 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 UNKQ9C0B0 810 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CIPCQ9C0C6 399 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 Q9H521 79 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 AKTIPQ9H8T0 292 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SARS2Q9NP81 518 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SDR39U1Q9NRG7 319 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 NMRK1Q9NWW6 199 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CACNA2D2Q9NY47 1150 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ZIM2Q9NZV7 527 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 DKK3Q9UBP4 350 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 SUN2Q9UH99 717 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 POLG2Q9UHN1 485 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 CROTQ9UKG9 612 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 INTS6Q9UL03 887 aaKnown RBP6.53□□□□□ -1.36
HDLBP-243ENST00000488923 PSMD13Q9UNM6 376 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 AP3M1Q9Y2T2 418 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 ANGPTL3Q9Y5C1 460 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 KIAA1671Q9BY89 1806 aa6.53□□□□□ -1.36
HDLBP-243ENST00000488923 IGLV3-16A0A075B6K0 115 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 KANSL1LA0AUZ9 987 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 NEDD8-MDP1E9PL57 170 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 K7EPI3 171 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 PSMD11O00231 422 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CDC7O00311 574 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 SLC28A1O00337 649 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 E2F3O00716 465 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 FFAR2O15552 330 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HOXC11O43248 304 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 SMAD6O43541 496 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 OR1I1O60431 355 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 DNAJA2O60884 412 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 BCAS2O75934 225 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 PDE5AO76074 875 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 AP2A2O94973 939 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 SLC25A14O95258 325 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 SIX3O95343 332 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CLDN7O95471 211 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 BAG2O95816 211 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 FTH1P02794 183 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 JUNP05412 331 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 ANXA5P08758 320 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 RPSAP08865 295 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 GSTM1P09488 218 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HIST1H2AGP0C0S8 130 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 PRR35P0CG20 571 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HGFP14210 728 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 TYRP14679 529 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HIST1H2ADP20671 130 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 GPX3P22352 226 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 XPAP23025 273 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HMOX2P30519 316 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 VIPR1P32241 457 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HSPA13P48723 471 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 SPINT3P49223 89 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CDKN1CP49918 316 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HNMTP50135 292 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CLNS1AP54105 237 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CDH13P55290 713 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 AP1S2P56377 157 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 KCNK10P57789 538 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 SESN3P58005 492 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 ERVFC1P60507 584 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 GSTM4Q03013 218 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CCNIQ14094 377 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 LRP8Q14114 963 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 MAP7Q14244 749 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 EIF4HQ15056 248 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 TEAD2Q15562 447 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CHRNA6Q15825 494 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 ZNF423Q2M1K9 1284 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 FUT11Q495W5 492 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 ATP6AP1LQ52LC2 224 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 PDCD4Q53EL6 469 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 XKR7Q5GH72 579 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 TMEM240Q5SV17 173 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 PLEKHS1Q5SXH7 462 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 GPRC6AQ5T6X5 926 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 PPP2R2DQ66LE6 453 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 REP15Q6BDI9 236 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CLEC6AQ6EIG7 209 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CRTC1Q6UUV9 634 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HPS6Q86YV9 775 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 PQLC1Q8N2U9 271 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 MINDY1Q8N5J2 469 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 TTC16Q8NEE8 873 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 DNAJB8Q8NHS0 232 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 SLC22A17Q8WUG5 538 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 UBTD2Q8WUN7 234 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 BHMTQ93088 406 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 POP5Q969H6 163 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 ATP6V1E2Q96A05 226 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CCDC124Q96CT7 223 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 DUS3LQ96G46 650 aaKnown RBP6.52□□□□□ -1.37
HDLBP-243ENST00000488923 CLPTM1LQ96KA5 538 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 HIST1H2AHQ96KK5 128 aa6.52□□□□□ -1.37
HDLBP-243ENST00000488923 LRGUKQ96M69 825 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms