RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 GPAMQ9HCL2 828 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 TRNAU1APQ9NX07 287 aaKnown RBP12.09□□□□□ -0.47
TRAIP-209ENST00000488860 PSMD13Q9UNM6 376 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 MED16Q9Y2X0 877 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 DNMT3AQ9Y6K1 912 aaPredicted RBP12.09□□□□□ -0.47
TRAIP-209ENST00000488860 DMDP11532 3685 aa12.09□□□□□ -0.47
TRAIP-209ENST00000488860 MUC6Q6W4X9 2439 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 KNL1Q8NG31 2342 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 A0A1B0GTQ1 180 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 FOXO6A8MYZ6 492 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 B4DGG1 531 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 LIN7AO14910 233 aaPredicted RBP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 KPNA5O15131 536 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 FFAR2O15552 330 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 ALDOAP04075 364 aaKnown RBP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 SLC35G4P0C7Q5 338 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 RPL10P27635 214 aaKnown RBP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 TYK2P29597 1187 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 GMPRP36959 345 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 TIAL1Q01085 375 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 DMPKQ09013 629 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 BNIP3Q12983 259 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 ELOCQ15369 112 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 SF3A2Q15428 464 aaKnown RBP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 ACSBG2Q5FVE4 666 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 PLEKHS1Q5SXH7 462 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 PAQR3Q6TCH7 311 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 GKN2Q86XP6 184 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 CYP4X1Q8N118 509 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 FSTL5Q8N475 847 aaPredicted RBP12.08□□□□□ -0.48
TRAIP-209ENST00000488860 MINDY1Q8N5J2 469 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 ASZ1Q8WWH4 475 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 INPP5DQ92835 1189 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 LINGO1Q96FE5 620 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 TMEM109Q9BVC6 243 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 WWP1Q9H0M0 922 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 VPS11Q9H270 941 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 ACBD3Q9H3P7 528 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 POPDC3Q9HBV1 291 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 PCMTD2Q9NV79 361 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 UCKL1Q9NWZ5 548 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 EURLQ9NYK6 297 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 RAPGEFL1Q9UHV5 662 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 LGALS13Q9UHV8 139 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 DHRS7Q9Y394 339 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 ST14Q9Y5Y6 855 aa12.08□□□□□ -0.48
TRAIP-209ENST00000488860 A0A096LPK6 155 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 C17orf113A0A1B0GUU1 675 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 SLC5A10A0PJK1 596 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 LNP1A1A4G5 178 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 KLHL33A6NCF5 533 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 GOLGA8RI6L899 631 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 YKT6O15498 198 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 SASH3O75995 380 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 MT-ND3P03897 115 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 ANXA6P08133 673 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 MYZAPP0CAP1 466 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 ZNF37AP17032 561 aaPredicted RBP12.07□□□□□ -0.48
TRAIP-209ENST00000488860 IDSP22304 550 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 DGKAP23743 735 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 CRABP2P29373 138 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 PDHA2P29803 388 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 RGS4P49798 205 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 CLCNKAP51800 687 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 IRF9Q00978 393 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 SHBQ15464 509 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 ZKSCAN8Q15776 578 aaPredicted RBP12.07□□□□□ -0.48
TRAIP-209ENST00000488860 DEFB133Q30KQ1 61 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 CROCCP2Q86T23 111 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 TBC1D1Q86TI0 1168 aaPredicted RBP12.07□□□□□ -0.48
TRAIP-209ENST00000488860 NRROSQ86YC3 692 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 GATAD2AQ86YP4 633 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 VRK3Q8IV63 474 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 GPBAR1Q8TDU6 330 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 MZB1Q8WU39 189 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 GLMNQ92990 594 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 PHOX2BQ99453 314 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 UNKQ9C0B0 810 aaKnown RBP12.07□□□□□ -0.48
TRAIP-209ENST00000488860 VIPAS39Q9H9C1 493 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 PRDM8Q9NQV8 689 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 SEMA4GQ9NTN9 838 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 ZNF446Q9NWS9 450 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 TAAR2Q9P1P5 351 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 SIRPGQ9P1W8 387 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 GULP1Q9UBP9 304 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 TBC1D29Q9UFV1 150 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 TLK1Q9UKI8 766 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 RUVBL2Q9Y230 463 aaKnown RBP12.07□□□□□ -0.48
TRAIP-209ENST00000488860 FRYLO94915 3013 aa12.07□□□□□ -0.48
TRAIP-209ENST00000488860 A0A087X1B8 175 aa12.06□□□□□ -0.48
TRAIP-209ENST00000488860 A0A1W2PPM1 405 aa12.06□□□□□ -0.48
TRAIP-209ENST00000488860 DFNA5O60443 496 aa12.06□□□□□ -0.48
TRAIP-209ENST00000488860 KCNJ13O60928 360 aa12.06□□□□□ -0.48
TRAIP-209ENST00000488860 ZNF806P0C7X5 589 aa12.06□□□□□ -0.48
TRAIP-209ENST00000488860 SLC35E2BP0CK96 405 aa12.06□□□□□ -0.48
TRAIP-209ENST00000488860 ATP5DP30049 168 aa12.06□□□□□ -0.48
TRAIP-209ENST00000488860 SKIV2L2P42285 1042 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms