RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TMEM26Q6ZUK4 368 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 SPATA19Q7Z5L4 167 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 HACD3Q9P035 362 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 FADS3Q9Y5Q0 445 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 TAPBPO15533 448 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 VPS4BO75351 444 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ATE1O95260 518 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 HMGA1P17096 107 aaKnown RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 TTPAP49638 278 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 NEK2P51955 445 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ERVK-8P63133 956 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 TAF12Q16514 161 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 INTS11Q5TA45 600 aaKnown RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 PTRHD1Q6GMV3 140 aaKnown RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 CYP20A1Q6UW02 462 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 SBSNQ6UWP8 590 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.48□□□□□ -0.412e-8■■■■■ 44
CLIC4-202ENST00000488683 SERPINA9Q86WD7 417 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 TRPV3Q8NET8 790 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 OR56A4Q8NGH8 313 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ABTB1Q969K4 478 aaPredicted RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 PYCR2Q96C36 320 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 NUSAP1Q9BXS6 441 aaKnown RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ARVCFO00192 962 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 LRATO95237 230 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 PRAMEF1O95521 474 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 MLYCDO95822 493 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 SHMT2P34897 504 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 FOXM1Q08050 763 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 GTF2H2Q13888 395 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 ATP6AP1Q15904 470 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 TMEM259Q4ZIN3 620 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 CYBRD1Q53TN4 286 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 GTF2H2CQ6P1K8 395 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 BORAQ6PGQ7 559 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 ZSWIM9Q86XI8 627 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 PTRH1Q86Y79 214 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 FAM126BQ8IXS8 530 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 MFSD2AQ8NA29 543 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 OR10A6Q8NH74 314 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 RNF217Q8TC41 542 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 SNRNP27Q8WVK2 155 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 KCNJ9Q92806 393 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 MUS81Q96NY9 551 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 TRIM15Q9C019 465 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 KLQ9UEF7 1012 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 SUN2Q9UH99 717 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 TDRKHQ9Y2W6 561 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 ST14Q9Y5Y6 855 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 C1orf232A0A0U1RR37 186 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 A0A1B0GVM2 712 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 H0Y858 1186 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 MTX2O75431 263 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 SLC25A14O95258 325 aaPredicted RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 PARNO95453 639 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 CHEK2O96017 543 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 IL7RP16871 459 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 RFC2P35250 354 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 STK19P49842 368 aaPredicted RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 ILF2Q12905 390 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 TMED1Q13445 227 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 SLC36A3Q495N2 470 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 TXNDC11Q6PKC3 985 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 DLEU7Q6UYE1 221 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 ANKS3Q6ZW76 656 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 C12orf43Q96C57 262 aaKnown RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 CENPNQ96H22 339 aaPredicted RBP12.47□□□□□ -0.41
CLIC4-202ENST00000488683 P2RY12Q9H244 342 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 ASB8Q9H765 288 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 COMMD8Q9NX08 183 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 LHX3Q9UBR4 397 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 CD84Q9UIB8 345 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 VPS51Q9UID3 782 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 ANAPC2Q9UJX6 822 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 INVSQ9Y283 1065 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 NEUROG3Q9Y4Z2 214 aa12.47□□□□□ -0.41
CLIC4-202ENST00000488683 LSM1O15116 133 aaKnown RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 AXIN1O15169 862 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 MBL2P11226 248 aaPredicted RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 CTSOP43234 321 aaPredicted RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ENTPD1P49961 510 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 SMAD3P84022 425 aaKnown RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 FOXD4Q12950 439 aaPredicted RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 FAM174BQ3ZCQ3 159 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 PDCD4Q53EL6 469 aaKnown RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ADGRF1Q5T601 910 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 NCEH1Q6PIU2 408 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 SKA2Q8WVK7 121 aaPredicted RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ISG20Q96AZ6 181 aaKnown RBP12.46□□□□□ -0.41
CLIC4-202ENST00000488683 ZNF382Q96SR6 550 aa12.46□□□□□ -0.41
CLIC4-202ENST00000488683 HAUS8Q9BT25 410 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms