RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 COG4Q9H9E3 785 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 MRM3Q9HC36 420 aaKnown RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 OCIAD1Q9NX40 245 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 SYBUQ9NX95 663 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 FOXJ2Q9P0K8 574 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 MARCH4Q9P2E8 410 aaPredicted RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 EPHA6Q9UF33 1036 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 MN1Q10571 1320 aaPredicted RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 ZNF106Q9H2Y7 1883 aaKnown RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 ZFC3H1O60293 1989 aaKnown RBP15.58■□□□□ 0.09
CTDSP1-209ENST00000488627 A8MU76 341 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 PRAMEF10O60809 474 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 TMEM63AO94886 807 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 AMD1P17707 334 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 PDHA2P29803 388 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 CSTF2P33240 577 aaKnown RBP eCLIP15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 TERF1P54274 439 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 SNAP47Q5SQN1 464 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 LYPLAL1Q5VWZ2 237 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 DUS1LQ6P1R4 473 aaKnown RBP15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 CERS6Q6ZMG9 384 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 LRRC69Q6ZNQ3 347 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 MCUQ8NE86 351 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 ZFPM2Q8WW38 1151 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 JPH3Q8WXH2 748 aaPredicted RBP15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 PMEPA1Q969W9 287 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 MFSD3Q96ES6 412 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 C9orf72Q96LT7 481 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 C12orf66Q96MD2 445 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 DPH1Q9BZG8 443 aa15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 IMP3Q9NV31 184 aaKnown RBP15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 AKAP7Q9P0M2 348 aaPredicted RBP15.58■□□□□ 0.08
CTDSP1-209ENST00000488627 AHCTF1Q8WYP5 2266 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 CAPN5O15484 640 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 GSTM1P09488 218 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 ANKRD34CP0C6C1 535 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 SLC35G4P0C7Q5 338 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 ABCG1P45844 678 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 CAPZBP47756 277 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 LEPRP48357 1165 aaKnown RBP15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 PPM1FP49593 454 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 MAPK10P53779 464 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 PRAMEP78395 509 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 GSTM4Q03013 218 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 RPA4Q13156 261 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 CLN3Q13286 438 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 FASTKD1Q53R41 847 aaKnown RBP15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 CES3Q6UWW8 571 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 LDB1Q86U70 411 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 JAMLQ86YT9 394 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 MPP5Q8N3R9 675 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 NAT8LQ8N9F0 302 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 KCNE4Q8WWG9 221 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.57■□□□□ 0.083e-8■■■■■ 70.6
CTDSP1-209ENST00000488627 RAB33BQ9H082 229 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 VPS37BQ9H9H4 285 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 KCND1Q9NSA2 647 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 SLC24A2Q9UI40 661 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 SOX13Q9UN79 622 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 LHX6Q9UPM6 363 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 PCDHGA3Q9Y5H0 932 aa15.57■□□□□ 0.08
CTDSP1-209ENST00000488627 GOLGA6L10A0A0M3HER8 536 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 EFCAB7A8K855 629 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 B4E171 279 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 QSOX1O00391 747 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 KIF1CO43896 1103 aaKnown RBP15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 MLNP12872 115 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 TSPAN7P41732 249 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 MAGEA3P43357 314 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 PREPP48147 710 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 ARCN1P48444 511 aaKnown RBP15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 CD151P48509 253 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 PPP1CAP62136 330 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 MC2RQ01718 297 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 ARMC3Q5W041 872 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 DTX1Q86Y01 620 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 AGGF1Q8N302 714 aaeCLIP15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 SLCO2A1Q92959 643 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 ART4Q93070 314 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 TGM7Q96PF1 710 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 TAAR9Q96RI9 348 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 DDX47Q9H0S4 455 aaKnown RBP15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 PRORYQ9H606 182 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 KIR3DX1Q9H7L2 352 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 SEMA5BQ9P283 1151 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 KLHL3Q9UH77 587 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 PCYOX1Q9UHG3 505 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 RALYQ9UKM9 306 aaKnown RBP15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 B3GALT1Q9Y5Z6 326 aa15.56■□□□□ 0.08
CTDSP1-209ENST00000488627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.56■□□□□ 0.081e-7■□□□□ 8.2
CTDSP1-209ENST00000488627 SLC5A10A0PJK1 596 aa15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 BHMG1C9JSJ3 638 aaPredicted RBP15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 TOX3O15405 576 aaPredicted RBP15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 CD3EAPO15446 510 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 KLK10O43240 276 aa15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 IVDP26440 423 aa15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 ACADLP28330 430 aa15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 PTGIRP43119 386 aa15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 SARNPP82979 210 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-209ENST00000488627 TGIF1Q15583 401 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms