RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 OR2M5A3KFT3 312 aa2.54□□□□□ -2
SMC4-220ENST00000488017 KCNK5O95279 499 aa2.54□□□□□ -2
SMC4-220ENST00000488017 GCNT3O95395 438 aa2.54□□□□□ -2
SMC4-220ENST00000488017 LDHAP00338 332 aaKnown RBP2.54□□□□□ -2
SMC4-220ENST00000488017 PRCPP42785 496 aa2.54□□□□□ -2
SMC4-220ENST00000488017 CD81P60033 236 aa2.54□□□□□ -2
SMC4-220ENST00000488017 RPS18P62269 152 aaKnown RBP2.54□□□□□ -2
SMC4-220ENST00000488017 POU5F1Q01860 360 aaKnown RBP2.54□□□□□ -2
SMC4-220ENST00000488017 GRAMD1BQ3KR37 738 aa2.54□□□□□ -2
SMC4-220ENST00000488017 CDONQ4KMG0 1287 aa2.54□□□□□ -2
SMC4-220ENST00000488017 CXorf66Q5JRM2 361 aaPredicted RBP2.54□□□□□ -2
SMC4-220ENST00000488017 DENND5BQ6ZUT9 1274 aa2.54□□□□□ -2
SMC4-220ENST00000488017 PIGZQ86VD9 579 aa2.54□□□□□ -2
SMC4-220ENST00000488017 RASGEF1CQ8N431 466 aa2.54□□□□□ -2
SMC4-220ENST00000488017 MIPOL1Q8TD10 442 aa2.54□□□□□ -2
SMC4-220ENST00000488017 TRIM63Q969Q1 353 aa2.54□□□□□ -2
SMC4-220ENST00000488017 NSL1Q96IY1 281 aa2.54□□□□□ -2
SMC4-220ENST00000488017 NYAP2Q9P242 653 aa2.54□□□□□ -2
SMC4-220ENST00000488017 CLIC4Q9Y696 253 aa2.54□□□□□ -2
SMC4-220ENST00000488017 HPRP00739 348 aa2.53□□□□□ -2
SMC4-220ENST00000488017 H1F0P07305 194 aaKnown RBP2.53□□□□□ -2
SMC4-220ENST00000488017 MMP12P39900 470 aa2.53□□□□□ -2
SMC4-220ENST00000488017 PIP4K2AP48426 406 aaPredicted RBP2.53□□□□□ -2
SMC4-220ENST00000488017 UBE3AQ05086 875 aa2.53□□□□□ -2
SMC4-220ENST00000488017 PPFIA1Q13136 1202 aa2.53□□□□□ -2
SMC4-220ENST00000488017 TAF13Q15543 124 aa2.53□□□□□ -2
SMC4-220ENST00000488017 Q6ZRP5 223 aa2.53□□□□□ -2
SMC4-220ENST00000488017 GSTA5Q7RTV2 222 aa2.53□□□□□ -2
SMC4-220ENST00000488017 ZNF554Q86TJ5 538 aa2.53□□□□□ -2
SMC4-220ENST00000488017 SLC47A2Q86VL8 602 aa2.53□□□□□ -2
SMC4-220ENST00000488017 HOGA1Q86XE5 327 aa2.53□□□□□ -2
SMC4-220ENST00000488017 LACC1Q8IV20 430 aa2.53□□□□□ -2
SMC4-220ENST00000488017 CRYBG2Q8N1P7 616 aa2.53□□□□□ -2
SMC4-220ENST00000488017 ZNF519Q8TB69 540 aa2.53□□□□□ -2
SMC4-220ENST00000488017 HSD17B8Q92506 261 aa2.53□□□□□ -2
SMC4-220ENST00000488017 GTF3C6Q969F1 213 aa2.53□□□□□ -2
SMC4-220ENST00000488017 ARPC5LQ9BPX5 153 aa2.53□□□□□ -2
SMC4-220ENST00000488017 ITM2CQ9NQX7 267 aa2.53□□□□□ -2
SMC4-220ENST00000488017 KCND2Q9NZV8 630 aa2.53□□□□□ -2
SMC4-220ENST00000488017 ABI3Q9P2A4 366 aa2.53□□□□□ -2
SMC4-220ENST00000488017 NTNG1Q9Y2I2 539 aa2.53□□□□□ -2
SMC4-220ENST00000488017 ACOD1A6NK06 481 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 MPTX1A8MV57 137 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 PEX14O75381 377 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 ICAM1P05362 532 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 GPIP06744 558 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 IL7RP16871 459 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 EFNA1P20827 205 aaPredicted RBP2.52□□□□□ -2.01
SMC4-220ENST00000488017 HRH2P25021 359 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 TMEM50BP56557 158 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 ZBED6P86452 979 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 CYCSP99999 105 aaKnown RBP2.52□□□□□ -2.01
SMC4-220ENST00000488017 ZFP36L1Q07352 338 aaKnown RBP2.52□□□□□ -2.01
SMC4-220ENST00000488017 SDCCAG8Q86SQ7 713 aaPredicted RBP2.52□□□□□ -2.01
SMC4-220ENST00000488017 ANKRD18AQ8IVF6 992 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 GPD1LQ8N335 351 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 PARP8Q8N3A8 854 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 OR4C3Q8NH37 302 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 PSPC1Q8WXF1 523 aaKnown RBP2.52□□□□□ -2.01
SMC4-220ENST00000488017 HERVK_113Q902F9 699 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 CNOT6LQ96LI5 555 aaKnown RBP2.52□□□□□ -2.01
SMC4-220ENST00000488017 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 PIGMQ9H3S5 423 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 PANK4Q9NVE7 773 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 POMT2Q9UKY4 750 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 PPP1R3CQ9UQK1 317 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 PCDHGB3Q9Y5G1 929 aa2.52□□□□□ -2.01
SMC4-220ENST00000488017 SNAP23O00161 211 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 MAP2K7O14733 419 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 TSPAN4O14817 238 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 PIGNO95427 931 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 IFIT1P09914 478 aaKnown RBP2.51□□□□□ -2.01
SMC4-220ENST00000488017 SELLP14151 372 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 FOLR2P14207 255 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 ABCD1P33897 745 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 DRD3P35462 400 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 OPRL1P41146 370 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 ZFP36L2P47974 494 aaKnown RBP2.51□□□□□ -2.01
SMC4-220ENST00000488017 MRPS34P82930 218 aaKnown RBP2.51□□□□□ -2.01
SMC4-220ENST00000488017 MOGAT2Q3SYC2 334 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 FAM109BQ6ICB4 259 aaPredicted RBP2.51□□□□□ -2.01
SMC4-220ENST00000488017 LDHAL6AQ6ZMR3 332 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 AZIN2Q96A70 460 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 KIF1BPQ96EK5 621 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 MYADMQ96S97 322 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 SEMA6AQ9H2E6 1030 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 ATP13A3Q9H7F0 1226 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 GNB4Q9HAV0 340 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 CWC15Q9P013 229 aaKnown RBP2.51□□□□□ -2.01
SMC4-220ENST00000488017 FBXW11Q9UKB1 542 aa2.51□□□□□ -2.01
SMC4-220ENST00000488017 INTS6Q9UL03 887 aaKnown RBP2.51□□□□□ -2.01
SMC4-220ENST00000488017 A0A1W2PN81 502 aa2.5□□□□□ -2.01
SMC4-220ENST00000488017 C15orf61A6NNL5 157 aa2.5□□□□□ -2.01
SMC4-220ENST00000488017 ATP2A1O14983 1001 aa2.5□□□□□ -2.01
SMC4-220ENST00000488017 ZBTB43O43298 467 aa2.5□□□□□ -2.01
SMC4-220ENST00000488017 DAB1O75553 588 aa2.5□□□□□ -2.01
SMC4-220ENST00000488017 NKX2-2O95096 273 aa2.5□□□□□ -2.01
SMC4-220ENST00000488017 IPO7O95373 1038 aaKnown RBP2.5□□□□□ -2.01
SMC4-220ENST00000488017 HSD3B1P14060 373 aa2.5□□□□□ -2.01
SMC4-220ENST00000488017 GP9P14770 177 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms