RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MC1RQ01726 317 aa23.97■■□□□ 1.43
LIME1-206ENST00000487026 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.97■■□□□ 1.43
LIME1-206ENST00000487026 BCL7AQ4VC05 210 aa23.97■■□□□ 1.43
LIME1-206ENST00000487026 DNTTIP2Q5QJE6 756 aaKnown RBP23.97■■□□□ 1.43
LIME1-206ENST00000487026 UBXN4Q92575 508 aa23.97■■□□□ 1.43
LIME1-206ENST00000487026 DCUN1D1Q96GG9 259 aa23.97■■□□□ 1.43
LIME1-206ENST00000487026 PACSIN2Q9UNF0 486 aaPredicted RBP23.97■■□□□ 1.43
LIME1-206ENST00000487026 OR5K3A6NET4 321 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 ARCN1P48444 511 aaKnown RBP23.96■■□□□ 1.43
LIME1-206ENST00000487026 CDKN1CP49918 316 aaPredicted RBP23.96■■□□□ 1.43
LIME1-206ENST00000487026 VAV2P52735 878 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 ZNF140P52738 457 aaPredicted RBP23.96■■□□□ 1.43
LIME1-206ENST00000487026 TUBB3Q13509 450 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 ERV3-1Q14264 604 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 GSE1Q14687 1217 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 PWWP2BQ6NUJ5 590 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 APOBEC4Q8WW27 367 aaKnown RBP23.96■■□□□ 1.43
LIME1-206ENST00000487026 RMDN2Q96LZ7 410 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 PDE7BQ9NP56 450 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 SLC24A2Q9UI40 661 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 AMFRQ9UKV5 643 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 RARRES3Q9UL19 164 aa23.96■■□□□ 1.43
LIME1-206ENST00000487026 A0A0U1RQJ8 604 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 UBA6A0AVT1 1052 aaPredicted RBP23.95■■□□□ 1.42
LIME1-206ENST00000487026 OR6C74A6NCV1 312 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 AGAP14A8MT82 685 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 LDB2O43679 373 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 FURINP09958 794 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 SLC35G4P0C7Q5 338 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 CCNYL3P0C7X3 344 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 PRSS56P0CW18 603 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 TPH1P17752 444 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 ARL4DP49703 201 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 CSRP3P50461 194 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 PDE1BQ01064 536 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 FBXO38Q6PIJ6 1188 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 KIAA1328Q86T90 577 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 NXPE1Q8N323 547 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 FAM71DQ8N9W8 422 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 LINC00615Q96LM1 132 aaPredicted RBP23.95■■□□□ 1.42
LIME1-206ENST00000487026 PPM1MQ96MI6 270 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 AKIRIN1Q9H9L7 192 aaPredicted RBP23.95■■□□□ 1.42
LIME1-206ENST00000487026 ARNT2Q9HBZ2 717 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 TUBD1Q9UJT1 453 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 PADI1Q9ULC6 663 aa23.95■■□□□ 1.42
LIME1-206ENST00000487026 GOLGA6L3A6NEY3 463 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 METTL18O95568 372 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 NTRK1P04629 796 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 PTMAP06454 111 aaKnown RBP23.94■■□□□ 1.42
LIME1-206ENST00000487026 RALBP11234 206 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 MC4RP32245 332 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 KRT33BQ14525 404 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 SKIDA1Q1XH10 827 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 CAPRIN2Q6IMN6 1127 aaKnown RBP23.94■■□□□ 1.42
LIME1-206ENST00000487026 ARHGEF18Q6ZSZ5 1173 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 PEX26Q7Z412 305 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 SNX20Q7Z614 316 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 TAB3Q8N5C8 712 aaPredicted RBP23.94■■□□□ 1.42
LIME1-206ENST00000487026 C9orf43Q8TAL5 461 aaPredicted RBP23.94■■□□□ 1.42
LIME1-206ENST00000487026 ULK4Q96C45 1275 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 ABHD17AQ96GS6 310 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 DNAJC1Q96KC8 554 aaKnown RBP23.94■■□□□ 1.42
LIME1-206ENST00000487026 COPS8Q99627 209 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 PCDHB3Q9Y5E6 796 aa23.94■■□□□ 1.42
LIME1-206ENST00000487026 TLCD2A6NGC4 264 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 ATP1B2P14415 290 aaPredicted RBP23.93■■□□□ 1.42
LIME1-206ENST00000487026 ITGALP20701 1170 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 HADHAP40939 763 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 TLE1Q04724 770 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 CRTC2Q53ET0 693 aaPredicted RBP23.93■■□□□ 1.42
LIME1-206ENST00000487026 FAM199XQ6PEV8 388 aaPredicted RBP23.93■■□□□ 1.42
LIME1-206ENST00000487026 TMEM135Q86UB9 458 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 OOSP2Q86WS3 158 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 OR4E2Q8NGC2 313 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 CT55Q8WUE5 264 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 ZFPM2Q8WW38 1151 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 NRTNQ99748 197 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 KIR3DX1Q9H7L2 352 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 LHX9Q9NQ69 397 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 FGF21Q9NSA1 209 aa23.93■■□□□ 1.42
LIME1-206ENST00000487026 PIH1D1Q9NWS0 290 aaKnown RBP23.93■■□□□ 1.42
LIME1-206ENST00000487026 R3HDM2Q9Y2K5 976 aaKnown RBP23.93■■□□□ 1.42
LIME1-206ENST00000487026 KLHL33A6NCF5 533 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 DDX3YO15523 660 aaKnown RBP23.92■■□□□ 1.42
LIME1-206ENST00000487026 FTCDO95954 541 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 POLR2CP19387 275 aaPredicted RBP23.92■■□□□ 1.42
LIME1-206ENST00000487026 PRLHRP49683 370 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 KPNA2P52292 529 aaKnown RBP23.92■■□□□ 1.42
LIME1-206ENST00000487026 HSD11B2P80365 405 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 ACY1Q03154 408 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 DNASE1L3Q13609 305 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 GPR19Q15760 415 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 PARP6Q2NL67 630 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 ZRANB3Q5FWF4 1079 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 KCTD11Q693B1 232 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 ARMC6Q6NXE6 501 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 CYB5D1Q6P9G0 228 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 TAS2R42Q7RTR8 314 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 KLHDC8BQ8IXV7 354 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 D2HGDHQ8N465 521 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms