RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ARRDC2Q8TBH0 407 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 RIOK2Q9BVS4 552 aaKnown RBP13.03□□□□□ -0.32
HMGN1-216ENST00000486741 DGCR6LQ9BY27 220 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 TRIP12Q14669 1992 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-216ENST00000486741 TRBV23OR9-2A0A075B6M9 112 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 GNRH1P01148 92 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 RBM44Q6ZP01 1051 aaKnown RBP13.03□□□□□ -0.32
HMGN1-216ENST00000486741 TRIM74Q86UV6 250 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 EID3Q8N140 333 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 PGBD5Q8N414 524 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 DTNBP1Q96EV8 351 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 SGK2Q9HBY8 427 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 DNAJC11Q9NVH1 559 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 B4GALT6Q9UBX8 382 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 SLC22A14Q9Y267 594 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 UPK3BL1B0FP48 263 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 LOC730098B7Z3J9 87 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 UPK3BL2E5RIL1 263 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 H0Y858 1186 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 CYP4B1P13584 511 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 CD70P32970 193 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 RAD23AP54725 363 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 CAP1Q01518 475 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 BNIP2Q12982 314 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 MYLK3Q32MK0 819 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 SLC44A4Q53GD3 710 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 DENND5AQ6IQ26 1287 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 ZNF549Q6P9A3 640 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 SLC39A13Q96H72 371 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 TRAPPC9Q96Q05 1148 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 IGSF5Q9NSI5 407 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 HCFC1R1Q9NWW0 138 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 IMPAD1Q9NX62 359 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 TBC1D14Q9P2M4 693 aa13.03□□□□□ -0.32
HMGN1-216ENST00000486741 COL11A1P12107 1806 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-216ENST00000486741 KLKB1P03952 638 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 FOXA1P55317 472 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 GSTA3Q16772 222 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 SLC39A5Q6ZMH5 540 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 BEND5Q7L4P6 421 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 ADCY4Q8NFM4 1077 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 LZICQ8WZA0 190 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 NR1H4Q96RI1 486 aaPredicted RBP13.02□□□□□ -0.32
HMGN1-216ENST00000486741 DNAJC15Q9Y5T4 150 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 BBIP1A8MTZ0 92 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 AGRPO00253 132 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 SAP18O00422 153 aaKnown RBP13.02□□□□□ -0.32
HMGN1-216ENST00000486741 G6PDP11413 515 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 ATP6V1E1P36543 226 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 PSMD8P48556 350 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 TMEM26Q6ZUK4 368 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 MICU2Q8IYU8 434 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 LRRC58Q96CX6 371 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 DERL2Q9GZP9 239 aa13.02□□□□□ -0.32
HMGN1-216ENST00000486741 EXOSC4Q9NPD3 245 aaKnown RBP13.02□□□□□ -0.32
HMGN1-216ENST00000486741 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 ANXA6P08133 673 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 IFNA8P32881 189 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 SGSHP51688 502 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 ADGRE1Q14246 886 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 CYP20A1Q6UW02 462 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 TRIM48Q8IWZ4 208 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.02□□□□□ -0.33
HMGN1-216ENST00000486741 MDGA1Q8NFP4 955 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 POF1BQ8WVV4 589 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 CLP1Q92989 425 aaKnown RBP13.02□□□□□ -0.33
HMGN1-216ENST00000486741 ZFYVE19Q96K21 471 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 MARCH5Q9NX47 278 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 SCN3BQ9NY72 215 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 RNF11Q9Y3C5 154 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 PRKAB1Q9Y478 270 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 MYOCOSA0A1B0GUC4 107 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 ANKDD1BA6NHY2 528 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 K7EPI3 171 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 TGM5O43548 720 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 CAPN15O75808 1086 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 EPORP19235 508 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 MTTPP55157 894 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 GDPD4Q6W3E5 623 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 ARMCX6Q7L4S7 300 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 TMEM25Q86YD3 366 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 ZC3H7AQ8IWR0 971 aaKnown RBP13.02□□□□□ -0.33
HMGN1-216ENST00000486741 BPIFB6Q8NFQ5 453 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 OR8D1Q8WZ84 308 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 OR2AG1Q9H205 316 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 C11orf49Q9H6J7 331 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 TREX1Q9NSU2 369 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 ADAMTS6Q9UKP5 1117 aa13.02□□□□□ -0.33
HMGN1-216ENST00000486741 LTBP1Q14766 1721 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 HNRNPRO43390 633 aaKnown RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 PGLSO95336 258 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 ADH1CP00326 375 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 PRDX3P30048 256 aaKnown RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 ARCN1P48444 511 aaKnown RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 ERVK-8P63133 956 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 DGCR6Q14129 220 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms