RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CLDN11O75508 207 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PRKD3O94806 890 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 KCNH1O95259 989 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TRUB2O95900 331 aaKnown RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PAK4O96013 591 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 FYNP06241 537 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 JMJD7P0C870 316 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 SRCP12931 536 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 IL11P20809 199 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 NUMBP49757 651 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 HNMTP50135 292 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PSMD7P51665 324 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 THOP1P52888 689 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ARF3P61204 181 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ARF1P84077 181 aaKnown RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 CETN1Q12798 172 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 LLGL1Q15334 1064 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TGIF1Q15583 401 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TBR1Q16650 682 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 IFI16Q16666 785 aaKnown RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 EDRF1Q3B7T1 1238 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 CCDC14Q49A88 953 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 SYPL2Q5VXT5 272 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 SEL1L3Q68CR1 1132 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ATL3Q6DD88 541 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TMEM154Q6P9G4 183 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 C6orf15Q6UXA7 325 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 LEKR1Q6ZMV7 388 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 SYDE1Q6ZW31 735 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TAC4Q86UU9 113 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 SLC35F3Q8IY50 421 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 OR56B2PQ8NGI1 322 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 FBXO27Q8NI29 283 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 AGR3Q8TD06 166 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TFAP2BQ92481 460 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 GAL3ST3Q96A11 431 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ALG14Q96F25 216 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 CABS1Q96KC9 395 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PPP1R13BQ96KQ4 1090 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 RPRD1AQ96P16 312 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 MED15Q96RN5 788 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 GFM1Q96RP9 751 aaKnown RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 CCDC3Q9BQI4 270 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TSGA10Q9BZW7 698 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 B3GNT4Q9C0J1 378 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ADNPQ9H2P0 1102 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 POPDC2Q9HBU9 364 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 NMRK1Q9NWW6 199 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 COX16Q9P0S2 106 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 VPS18Q9P253 973 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ATPIF1Q9UII2 106 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PADI4Q9UM07 663 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ZFR2Q9UPR6 939 aaKnown RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 HS3ST2Q9Y278 367 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PCDHB4Q9Y5E5 795 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PCDHGB6Q9Y5F9 930 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 MRFAP1Q9Y605 127 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 SESN1Q9Y6P5 492 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 TEX15Q9BXT5 2789 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 ICE1Q9Y2F5 2266 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CTAGE15A4D2H0 777 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 RGSL1A5PLK6 1076 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 B9A039 149 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 LMO7DNF2Z398 122 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 NTN3O00634 580 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 PSMA7O14818 248 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 NOBOXO60393 691 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 PLGP00747 810 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CTSLP07711 333 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CTAGE8P0CG41 777 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CD8BP10966 210 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 BPIP17213 487 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CR2P20023 1033 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CDH3P22223 829 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CD82P27701 267 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CCR1P32246 355 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 RPL34P49207 117 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 BLKP51451 505 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 ADKP55263 362 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 YWHAZP63104 245 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 IFI35P80217 286 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 HTD2P86397 168 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CDK17Q00537 523 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 PPIDQ08752 370 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 LRMPQ12912 555 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 TRAP1Q12931 704 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 INPP5AQ14642 412 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 MAPKAPK3Q16644 382 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 ZNF674Q2M3X9 581 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 C2orf76Q3KRA6 126 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 FBXO48Q5FWF7 155 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 TCTE1Q5JU00 501 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 SNAP47Q5SQN1 464 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 FAXCQ5TGI0 409 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 FBXL22Q6P050 247 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 LRFN4Q6PJG9 635 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CEP128Q6ZU80 1094 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 FAM214BQ7L5A3 538 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CTAGE6Q86UF2 777 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms