RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 HEBP1Q9NRV9 189 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 DEC1Q9P2X7 70 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 GPR45Q9Y5Y3 372 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 DOCK8Q8NF50 2099 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 NCF1BA6NI72 391 aaPredicted RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 NCF1CA8MVU1 366 aaPredicted RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 NPIPB8E9PQR5 432 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 H0Y3Z8 333 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 GFYI3L273 518 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 TRIM38O00635 465 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 FBP2O00757 339 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 OR7A17O14581 309 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 TAPBPO15533 448 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 BCAS2O75934 225 aaPredicted RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 SLCO2B1O94956 709 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 NPPAP01160 153 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 EBLN1P0CF75 366 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 HGFP14210 728 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 NCF1P14598 390 aaPredicted RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 ANPEPP15144 967 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ACADSP16219 412 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 XPAP23025 273 aaPredicted RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 ME2P23368 584 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 CCR7P32248 378 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 THOP1P52888 689 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ERVPABLB-1P60509 514 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ZNF33BQ06732 778 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 TRAP1Q12931 704 aaKnown RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 CCNIQ14094 377 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 RAB30Q15771 203 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 PHKG1Q16816 387 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 LETMD1Q6P1Q0 360 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 LIPIQ6XZB0 460 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 GK5Q6ZS86 529 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 HSD11B1LQ7Z5J1 315 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 C12orf40Q86WS4 652 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 HPS6Q86YV9 775 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 FUNDC1Q8IVP5 155 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 NAT16Q8N8M0 369 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 PPFIBP2Q8ND30 876 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 BTN2A2Q8WVV5 523 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ASB11Q8WXH4 323 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 OR8D1Q8WZ84 308 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ASB9Q96DX5 294 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 PPP1R16AQ96I34 528 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 MARK4Q96L34 752 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 KCNA7Q96RP8 456 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 HOPXQ9BPY8 73 aaPredicted RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 TMEM79Q9BSE2 394 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 NSUN3Q9H649 340 aaKnown RBP11.75□□□□□ -0.53
PKP4-213ENST00000486254 PARVBQ9HBI1 364 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 ASIC5Q9NY37 505 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 WWOXQ9NZC7 414 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 CCDC167Q9P0B6 97 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 OPTCQ9UBM4 332 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 PCDHGA7Q9Y5G6 932 aa11.75□□□□□ -0.53
PKP4-213ENST00000486254 TCF20Q9UGU0 1960 aaKnown RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 A0A1B0GTL3 188 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 ATP6AP2A0A1C7CYW4 349 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 HEPACAM2A8MVW5 462 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 IFRD1O00458 451 aaPredicted RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 MRASO14807 208 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 CASQ2O14958 399 aaPredicted RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 AREL1O15033 823 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 TRIM24O15164 1050 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 SGTAO43765 313 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 ATP6AP2O75787 350 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 OR4F21O95013 312 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 CSPG5O95196 566 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 ELFN1P0C7U0 828 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 FCARP24071 287 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 PRDX3P30048 256 aaKnown RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 NRIP1P48552 1158 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 PRLHRP49683 370 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 PSME3P61289 254 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 EMX2Q04743 252 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 DPTQ07507 201 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 PCDH1Q08174 1060 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 MAD2L1Q13257 205 aaPredicted RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 MMEL1Q495T6 779 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 TCEAL5Q5H9L2 206 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 SAMD4BQ5PRF9 694 aaKnown RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 TLDC1Q6P9B6 456 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 BLOC1S3Q6QNY0 202 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 TMC5Q6UXY8 1006 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 Q6ZVL8 140 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 PARS2Q7L3T8 475 aaKnown RBP11.74□□□□□ -0.53
PKP4-213ENST00000486254 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 DHDDSQ86SQ9 333 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 KLHDC8AQ8IYD2 350 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 CPA6Q8N4T0 437 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 MINDY1Q8N5J2 469 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 TERB1Q8NA31 727 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 GOLM1Q8NBJ4 401 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 UCMAQ8WVF2 138 aa11.74□□□□□ -0.53
PKP4-213ENST00000486254 ASZ1Q8WWH4 475 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms