RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GEMP55040 296 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 AP1S1P61966 158 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 CDK3Q00526 305 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 ILF2Q12905 390 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF235Q14590 738 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TMED2Q15363 201 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 SPANXN3Q5MJ09 141 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 PHF19Q5T6S3 580 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 SLC30A9Q6PML9 568 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 MICALCLQ6ZW33 695 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 MARK2Q7KZI7 788 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TECPR1Q7Z6L1 1165 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 SRRM1Q8IYB3 904 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 NAGSQ8N159 534 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TAB3Q8N5C8 712 aaPredicted RBP9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 LSM14AQ8ND56 463 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 GPBAR1Q8TDU6 330 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 ZDHHC1Q8WTX9 485 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 NSMCE1Q8WV22 266 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 DCAKDQ8WVC6 231 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 PIH1D2Q8WWB5 315 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 EXTL1Q92935 676 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 SCAMP4Q969E2 229 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 DTD2Q96FN9 168 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 CHMP6Q96FZ7 201 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 NUDCD1Q96RS6 583 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 CCNL2Q96S94 520 aaPredicted RBP9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 MGME1Q9BQP7 344 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TEX101Q9BY14 249 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 FAM107BQ9H098 131 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 NSRP1Q9H0G5 558 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 ABCG8Q9H221 673 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TRABDQ9H4I3 376 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 WDR26Q9H7D7 661 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 NT5MQ9NPB1 228 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 CASS4Q9NQ75 786 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 MOCS1Q9NZB8 636 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TAAR2Q9P1P5 351 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 SAMD15Q9P1V8 674 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 APPL1Q9UKG1 709 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 PRKAB1Q9Y478 270 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 MAD1L1Q9Y6D9 718 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 BSNQ9UPA5 3926 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 FAM159BA6NKW6 160 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 KCNK1O00180 336 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 NDUFAB1O14561 156 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 TNFRSF10CO14798 259 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 PGLSO95336 258 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 JCHAINP01591 159 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 SNRPAP09012 282 aaKnown RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 HOXC4P09017 264 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 JMJD7P0C870 316 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 MYCLP1P12525 358 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CD1CP29017 333 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 UCNP55089 124 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 POLR2LP62875 67 aaKnown RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CTBSQ01459 385 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 DSC2Q02487 901 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 PTSQ03393 145 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 NIPAL4Q0D2K0 466 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CDH17Q12864 832 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 ARHGEF7Q14155 803 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 RFTN1Q14699 578 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 SLC14A2Q15849 920 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 KBTBD12Q3ZCT8 623 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 RAET1GQ6H3X3 334 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 UNC5AQ6ZN44 842 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 C17orf82Q86X59 251 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 IGDCC3Q8IVU1 814 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CYP4X1Q8N118 509 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 WDR48Q8TAF3 677 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 DYDC1Q8WWB3 177 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 GRAMD1AQ96CP6 724 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CFAP36Q96G28 342 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 ZNF599Q96NL3 588 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CCT8L2Q96SF2 557 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 SEMA3CQ99985 751 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 IL22Q9GZX6 179 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 GLOD4Q9HC38 313 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 KCNK9Q9NPC2 374 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CTNNAL1Q9UBT7 734 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 TBK1Q9UHD2 729 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 PHTF1Q9UMS5 762 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 CHKBQ9Y259 395 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 TTLL3Q9Y4R7 772 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 OAS3Q9Y6K5 1087 aaKnown RBP9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 MYO9AB2RTY4 2548 aa9.27□□□□□ -0.93
TMEM39A-208ENST00000486159 SPTAN1Q13813 2472 aaKnown RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 SDK2Q58EX2 2172 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 IGHV5-10-1A0A0J9YXX1 117 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 FAM237BA0A1B0GVD1 139 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 B8ZZF3 427 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 EBAG9O00559 213 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 INPP4BO15327 924 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 FZD6O60353 706 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 AVILO75366 819 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 BANF1O75531 89 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 USP1O94782 785 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms