RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 ALPK1Q96QP1 1244 aa9.35□□□□□ -0.91
PTPN7-213ENST00000486116 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
PTPN7-213ENST00000486116 ZNF358Q9NW07 568 aa9.35□□□□□ -0.91
PTPN7-213ENST00000486116 IFT80Q9P2H3 777 aaPredicted RBP9.35□□□□□ -0.91
PTPN7-213ENST00000486116 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
PTPN7-213ENST00000486116 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
PTPN7-213ENST00000486116 ADAM21Q9UKJ8 722 aa9.35□□□□□ -0.91
PTPN7-213ENST00000486116 CFAP45Q9UL16 551 aa9.35□□□□□ -0.91
PTPN7-213ENST00000486116 ZANQ9Y493 2812 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 TRAV17A0A0B4J275 112 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 OR6C74A6NCV1 312 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 FOXO6A8MYZ6 492 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 H3BMH7 237 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 PSMA7O14818 248 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 PROM1O43490 865 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 VEGFDO43915 354 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 MTX2O75431 263 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 SLC25A14O95258 325 aaPredicted RBP9.34□□□□□ -0.91
PTPN7-213ENST00000486116 MMEP08473 750 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 ZSCAN22P10073 491 aaPredicted RBP9.34□□□□□ -0.91
PTPN7-213ENST00000486116 UNGP13051 313 aaPredicted RBP9.34□□□□□ -0.91
PTPN7-213ENST00000486116 ST6GAL1P15907 406 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 GPD1P21695 349 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 UGT1A4P22310 534 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 PON1P27169 355 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 HTR7P34969 479 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 HALP42357 657 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 STX17P56962 302 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 PMP22Q01453 160 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 TFF3Q07654 80 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 GALNT3Q14435 633 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 ZNF569Q5MCW4 686 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 KIRREL2Q6UWL6 708 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 NOP9Q86U38 636 aaKnown RBP9.34□□□□□ -0.91
PTPN7-213ENST00000486116 DMRTC2Q8IXT2 367 aaPredicted RBP9.34□□□□□ -0.91
PTPN7-213ENST00000486116 DNAAF3Q8N9W5 541 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 ANKRD20A12PQ8NF67 263 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 CA5BP1Q8WTZ4 195 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 SDCCAG3Q96C92 435 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 MAGED4Q96JG8 741 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 KCNN3Q9UGI6 736 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 SERTAD3Q9UJW9 196 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 POMT2Q9UKY4 750 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 PSMD13Q9UNM6 376 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 PLEKHA6Q9Y2H5 1048 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 HS3ST3B1Q9Y662 390 aa9.34□□□□□ -0.91
PTPN7-213ENST00000486116 CUBNO60494 3623 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 EEF2KO00418 725 aaKnown RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 ADAM10O14672 748 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 PRAMEF2O60811 474 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 ZNF202O95125 648 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 RASAL1O95294 804 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 LY6G6DO95868 133 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 F10P00742 488 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 CD63P08962 238 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 ERCC2P18074 760 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 POLR2CP19387 275 aaPredicted RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 CDH3P22223 829 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 MMP8P22894 467 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 PCSK6P29122 969 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 SOX11P35716 441 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 BPIFB4P59827 614 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 DCDP81605 110 aaKnown RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 DSG2Q14126 1118 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 CA9Q16790 459 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 TUBB8Q3ZCM7 444 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 RALGPS1Q5JS13 557 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 RHBDD2Q6NTF9 364 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 ARMC6Q6NXE6 501 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 WDR59Q6PJI9 974 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 GBP6Q6ZN66 633 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 FAM83HQ6ZRV2 1179 aaPredicted RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 CDHR3Q6ZTQ4 885 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 SPPL2CQ8IUH8 684 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 NDUFAF2Q8N183 169 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 PHF10Q8WUB8 498 aaKnown RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 NACC2Q96BF6 587 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 DHTKD1Q96HY7 919 aaPredicted RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 DMRTA2Q96SC8 542 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 MESP1Q9BRJ9 268 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 C11orf70Q9BRQ4 267 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 C1GALT1Q9NS00 363 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 SLC22A11Q9NSA0 550 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 DNAJB12Q9NXW2 375 aaKnown RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 PKD2L2Q9NZM6 624 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 DHCR7Q9UBM7 475 aaKnown RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 CDC23Q9UJX2 597 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 CFAP20Q9Y6A4 193 aaKnown RBP9.33□□□□□ -0.92
PTPN7-213ENST00000486116 ANK2Q01484 3957 aa9.33□□□□□ -0.92
PTPN7-213ENST00000486116 C1orf232A0A0U1RR37 186 aa9.32□□□□□ -0.92
PTPN7-213ENST00000486116 C17orf113A0A1B0GUU1 675 aa9.32□□□□□ -0.92
PTPN7-213ENST00000486116 DYTNA2CJ06 578 aa9.32□□□□□ -0.92
PTPN7-213ENST00000486116 NKX2-6A6NCS4 301 aa9.32□□□□□ -0.92
PTPN7-213ENST00000486116 ZNHIT1O43257 154 aa9.32□□□□□ -0.92
PTPN7-213ENST00000486116 HCRTR1O43613 425 aa9.32□□□□□ -0.92
PTPN7-213ENST00000486116 ZWINTO95229 277 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms