RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 DKK4Q9UBT3 224 aa12.19□□□□□ -0.46
HMG20B-211ENST00000486028 MAD1L1Q9Y6D9 718 aa12.19□□□□□ -0.46
HMG20B-211ENST00000486028 EPG5Q9HCE0 2579 aa12.19□□□□□ -0.46
HMG20B-211ENST00000486028 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 MYLKQ15746 1914 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 SMAPO00193 183 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 TTI1O43156 1089 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 OR1I1O60431 355 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 NDUFS3O75489 264 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 CAPNS1P04632 268 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 MPOP05164 745 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 MTHFD1P11586 935 aaKnown RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 AMD1P17707 334 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 IVDP26440 423 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 ARNTP27540 789 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 MAPK9P45984 424 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 PDX1P52945 283 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 GABREP78334 506 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 EIF3IQ13347 325 aaKnown RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 KRT33BQ14525 404 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 SEMA3AQ14563 771 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 MORF4L2Q15014 288 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 KIAA0930Q6ICG6 404 aaPredicted RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 NEPROQ6NW34 567 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 TMEM71Q6P5X7 295 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 WDR74Q6RFH5 385 aaPredicted RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 RAB11FIP2Q7L804 512 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 LDB1Q86U70 411 aaPredicted RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 TMEM135Q86UB9 458 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 LRRC6Q86X45 466 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 SLITRK4Q8IW52 837 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 MDM1Q8TC05 714 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 ZFPM2Q8WW38 1151 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 NCSTNQ92542 709 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 STAMBPL1Q96FJ0 436 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 SIGLEC10Q96LC7 697 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 C12orf66Q96MD2 445 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 TCF12Q99081 682 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 TBC1D10AQ9BXI6 508 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 SEMA6CQ9H3T2 930 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 IMP3Q9NV31 184 aaKnown RBP12.18□□□□□ -0.46
HMG20B-211ENST00000486028 SATB2Q9UPW6 733 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 HEBP2Q9Y5Z4 205 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 PRSS21Q9Y6M0 314 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 RPS6KL1Q9Y6S9 549 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 COLEC10Q9Y6Z7 277 aa12.18□□□□□ -0.46
HMG20B-211ENST00000486028 ACACAQ13085 2346 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 IGHV5-10-1A0A0J9YXX1 117 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 FAM187AA6NFU0 413 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 EFCAB8A8MWE9 144 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 IFRD1O00458 451 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 PRMT5O14744 637 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 NDC80O14777 642 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 LIN7AO14910 233 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 BRINP1O60477 761 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 UBXN7O94888 489 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 TUBB4AP04350 444 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 TYRP1P17643 537 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 NDUFS1P28331 727 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 ARCN1P48444 511 aaKnown RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 LIMK2P53671 638 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 PLOD1Q02809 727 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 CKAP4Q07065 602 aaKnown RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 TRA2AQ13595 282 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■□□□□ 11.1
HMG20B-211ENST00000486028 THOC5Q13769 683 aaKnown RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 GPR18Q14330 331 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 ST3GAL2Q16842 350 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 ZNF658BQ4V348 819 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 C3orf38Q5JPI3 329 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 RNF187Q5TA31 235 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 PTRHD1Q6GMV3 140 aaKnown RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 CAPRIN2Q6IMN6 1127 aaKnown RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 ZNF574Q6ZN55 896 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 TMPRSS9Q7Z410 1059 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 PLXDC1Q8IUK5 500 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 FBXO39Q8N4B4 442 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 LILRA3Q8N6C8 439 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 GPR150Q8NGU9 434 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 ELMO1Q92556 727 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 ZNF669Q96BR6 464 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 SNF8Q96H20 258 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 FCRL3Q96P31 734 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 INSM2Q96T92 566 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 CMKLR1Q99788 373 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 TRIM51Q9BSJ1 452 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 NAT9Q9BTE0 207 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 TRIM31Q9BZY9 425 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 CFAP20Q9Y6A4 193 aaKnown RBP12.17□□□□□ -0.46
HMG20B-211ENST00000486028 APC2O95996 2303 aa12.17□□□□□ -0.46
HMG20B-211ENST00000486028 PRAMEF33A0A0G2JMD5 474 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 GOLGA8KD6RF30 607 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 GOLGA8TH3BQL2 631 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 PLD2O14939 933 aa12.16□□□□□ -0.46
HMG20B-211ENST00000486028 HGSO14964 777 aaPredicted RBP12.16□□□□□ -0.46
HMG20B-211ENST00000486028 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
HMG20B-211ENST00000486028 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms