RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PRKAB1Q9Y478 270 aa8.12□□□□□ -1.11
SF3A1-208ENST00000485618 IGF2RP11717 2491 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 ADAMTS9Q9P2N4 1935 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 ZZEF1O43149 2961 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 EME2A4GXA9 379 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 GOLGA8KD6RF30 607 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 GOLGA8TH3BQL2 631 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 MAP3K7O43318 606 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CBFA2T3O75081 653 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 VPS26AO75436 327 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 RFPL3O75679 317 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 S1PR4O95977 384 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 FUCA1P04066 466 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 FTH1P19P0C7X4 201 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 ERVK-10P10266 1014 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 PKMP14618 531 aaKnown RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 XRCC1P18887 633 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 AK4P27144 223 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 PBLDP30039 288 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 LEPRP48357 1165 aaKnown RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CARSP49589 748 aaKnown RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 RGS4P49798 205 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CTSCP53634 463 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 B4GALNT1Q00973 533 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 TCEA2Q15560 299 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 PROX2Q3B8N5 592 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 PLA2G4EQ3MJ16 856 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 KHDC1Q4VXA5 237 aaKnown RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 PLEKHS1Q5SXH7 462 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 LGSNQ5TDP6 509 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 TRMT10CQ7L0Y3 403 aaKnown RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 RAB44Q7Z6P3 723 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 NRROSQ86YC3 692 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CNTN4Q8IWV2 1026 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 GALNT15Q8N3T1 639 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 SFRP1Q8N474 314 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 C2CD4AQ8NCU7 369 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 PHC3Q8NDX5 983 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 GPR156Q8NFN8 814 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 MAGEC3Q8TD91 643 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 GRAMD1AQ96CP6 724 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 TSPAN17Q96FV3 270 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 AHCYL2Q96HN2 611 aaKnown RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 PWWP2AQ96N64 755 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CYTH2Q99418 400 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 SLC38A3Q99624 504 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 MVB12BQ9H7P6 319 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 UCK1Q9HA47 277 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 SARS2Q9NP81 518 aaKnown RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 ZDHHC18Q9NUE0 388 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 POT1Q9NUX5 634 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 MOCS1Q9NZB8 636 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 AKAP7Q9P0M2 348 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-208ENST00000485618 LRIT1Q9P2V4 623 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CPNE7Q9UBL6 633 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 TBC1D29Q9UFV1 150 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 POLG2Q9UHN1 485 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 BTBD3Q9Y2F9 522 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CRYL1Q9Y2S2 319 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 CEP295Q9C0D2 2601 aa8.11□□□□□ -1.11
SF3A1-208ENST00000485618 EIF3FO00303 357 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-208ENST00000485618 TP73O15350 636 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 GPR39O43194 453 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 OR1I1O60431 355 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 CBSLP0DN79 551 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 ENO3P13929 434 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-208ENST00000485618 ARNTP27540 789 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 RPL10P27635 214 aaKnown RBP8.1□□□□□ -1.11
SF3A1-208ENST00000485618 CBSP35520 551 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 SLC1A2P43004 574 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 FASLGP48023 281 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 GPLD1P80108 840 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 HHEXQ03014 270 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 HSPA14Q0VDF9 509 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 CTBP1Q13363 440 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 BOP1Q14137 746 aaKnown RBP8.1□□□□□ -1.11
SF3A1-208ENST00000485618 KCTD19Q17RG1 926 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-208ENST00000485618 MAP9Q49MG5 647 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 CCDC157Q569K6 752 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 TEDDM1Q5T9Z0 273 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 ARMC6Q6NXE6 501 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 C19orf48Q6RUI8 117 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 ZDHHC24Q6UX98 284 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 EFL1Q7Z2Z2 1120 aaKnown RBP8.1□□□□□ -1.11
SF3A1-208ENST00000485618 IGDCC3Q8IVU1 814 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 CTAGE3PQ8IX95 158 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 SLC35F3Q8IY50 421 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 ARL14Q8N4G2 192 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 PNPLA1Q8N8W4 532 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 KYQ8NBH2 561 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 OR10G6Q8NH81 332 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 CCL4L1Q8NHW4 92 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 IFI44Q8TCB0 444 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 SKA2Q8WVK7 121 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-208ENST00000485618 LPGAT1Q92604 370 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 KCNJ9Q92806 393 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 INPP5DQ92835 1189 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 C9orf72Q96LT7 481 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 C12orf66Q96MD2 445 aa8.1□□□□□ -1.11
SF3A1-208ENST00000485618 CPNE1Q99829 537 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms