RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PPM1FP49593 454 aaPredicted RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 HHEXQ03014 270 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 BIRC2Q13490 618 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 AMZ1Q400G9 498 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 SYTL3Q4VX76 610 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 LYPLAL1Q5VWZ2 237 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 METRNLQ641Q3 311 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 IYDQ6PHW0 289 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 LVRNQ6Q4G3 990 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 SFRP1Q8N474 314 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 FAM181AQ8N9Y4 354 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 SIDT2Q8NBJ9 832 aaKnown RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 C2CD4AQ8NCU7 369 aaPredicted RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 PHC3Q8NDX5 983 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 ZNF514Q96K75 400 aaPredicted RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 C12orf66Q96MD2 445 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 CCDC3Q9BQI4 270 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 FAM167BQ9BTA0 163 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 CDC42EP4Q9H3Q1 356 aaKnown RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 NINJ2Q9NZG7 142 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 MTRF1LQ9UGC7 380 aaKnown RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 GNPTGQ9UJJ9 305 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 ATXN7L1Q9ULK2 861 aaPredicted RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 MED16Q9Y2X0 877 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 EME2A4GXA9 379 aaPredicted RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 CHRM3P20309 590 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 MAPK9P45984 424 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 OR1D5P58170 312 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 ERCC6LQ2NKX8 1250 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 KBTBD12Q3ZCT8 623 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 DGLUCYQ7Z3D6 616 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 IFT20Q8IY31 132 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 GPATCH11Q8N954 259 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 LMNTD1Q8N9Z9 388 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 GIMAP7Q8NHV1 300 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 HM13Q8TCT9 377 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 MAPK15Q8TD08 544 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 FBF1Q8TES7 1133 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 HEXDCQ8WVB3 486 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 LINC00615Q96LM1 132 aaPredicted RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 INSM2Q96T92 566 aaPredicted RBP11.63□□□□□ -0.55
APTX-227ENST00000485479 CDC6Q99741 560 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 TBC1D10AQ9BXI6 508 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 MOCS1Q9NZB8 636 aa11.63□□□□□ -0.55
APTX-227ENST00000485479 UNC13CQ8NB66 2214 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 E5RI56 91 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 EIF3HO15372 352 aaKnown RBP eCLIP11.62□□□□□ -0.55
APTX-227ENST00000485479 AP2A2O94973 939 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 C1QAP02745 245 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 FTH1P02794 183 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 SLC35G4P0C7Q5 338 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 MPSTP25325 297 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 GMPRP36959 345 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 PPARGP37231 505 aaPredicted RBP11.62□□□□□ -0.55
APTX-227ENST00000485479 VSNL1P62760 191 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 DMPKQ09013 629 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 MGAT5Q09328 741 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 ZNF460Q14592 562 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 N4BP2L1Q5TBK1 243 aaPredicted RBP11.62□□□□□ -0.55
APTX-227ENST00000485479 OGFOD3Q6PK18 319 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 STRA8Q7Z7C7 330 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 CCNJLQ8IV13 435 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 CNTN4Q8IWV2 1026 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 CTAGE3PQ8IX95 158 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 CHCHD4Q8N4Q1 142 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 CFAP61Q8NHU2 1237 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 CALML6Q8TD86 181 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 SKA2Q8WVK7 121 aaPredicted RBP11.62□□□□□ -0.55
APTX-227ENST00000485479 OR52A5Q9H2C5 316 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 CPNE7Q9UBL6 633 aa11.62□□□□□ -0.55
APTX-227ENST00000485479 RHPN2P1A8MT19 583 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 RFPL3O75679 317 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 PKMP14618 531 aaKnown RBP11.61□□□□□ -0.55
APTX-227ENST00000485479 ACP1P24666 158 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 LEPRP48357 1165 aaKnown RBP11.61□□□□□ -0.55
APTX-227ENST00000485479 CDKN2DP55273 166 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 FOXC1Q12948 553 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 PRKG2Q13237 762 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 RPE65Q16518 533 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 RNF187Q5TA31 235 aaPredicted RBP11.61□□□□□ -0.55
APTX-227ENST00000485479 USP53Q70EK8 1073 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 OTOAQ7RTW8 1153 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 TMPRSS9Q7Z410 1059 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 TRIM48Q8IWZ4 208 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 ZBTB9Q96C00 473 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 GPR21Q99679 349 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 INTS10Q9NVR2 710 aaKnown RBP11.61□□□□□ -0.55
APTX-227ENST00000485479 PLAGL1Q9UM63 463 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 CDYLQ9Y232 598 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 NFS1Q9Y697 457 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 AKAP13Q12802 2813 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 A0A1W2PQM1 296 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 HYAL3O43820 417 aaPredicted RBP11.61□□□□□ -0.55
APTX-227ENST00000485479 RPLP0P05388 317 aaKnown RBP11.61□□□□□ -0.55
APTX-227ENST00000485479 GLB1P16278 677 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 RPS3P23396 243 aaKnown RBP eCLIP11.61□□□□□ -0.55
APTX-227ENST00000485479 AOAHP28039 575 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 CCL7P80098 99 aa11.61□□□□□ -0.55
APTX-227ENST00000485479 TIAL1Q01085 375 aaKnown RBP eCLIP11.61□□□□□ -0.55
APTX-227ENST00000485479 ABRQ12979 859 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms