RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 OR52A5Q9H2C5 316 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 VPS9D1Q9Y2B5 631 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 HEBP2Q9Y5Z4 205 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 MAD1L1Q9Y6D9 718 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 USP24Q9UPU5 2620 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 LAMA5O15230 3695 aa17.4■□□□□ 0.38
SREBF1-213ENST00000485080 CELSR3Q9NYQ7 3312 aa17.39■□□□□ 0.38
SREBF1-213ENST00000485080 E7ESA3 106 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 DUX1O43812 170 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 NDUFS3O75489 264 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 SLC35G4P0C7Q5 338 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 NDUFS1P28331 727 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 DHX9Q08211 1270 aaKnown RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 EIF3IQ13347 325 aaKnown RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 HIF1AQ16665 826 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 LONRF1Q17RB8 773 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 LDB1Q86U70 411 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 LILRA3Q8N6C8 439 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 KDF1Q8NAX2 398 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 OR4D9Q8NGE8 314 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 LPGAT1Q92604 370 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 TMEM159Q96B96 161 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 CXorf40BQ96DE9 158 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 NXPE2Q96DL1 559 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 RMDN2Q96LZ7 410 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 INSM2Q96T92 566 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 TRIM56Q9BRZ2 755 aaKnown RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 TSSK1BQ9BXA7 367 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 WWP1Q9H0M0 922 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 INTS10Q9NVR2 710 aaKnown RBP17.39■□□□□ 0.37
SREBF1-213ENST00000485080 SNX24Q9Y343 169 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 MRFAP1Q9Y605 127 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 KIF26BQ2KJY2 2108 aa17.39■□□□□ 0.37
SREBF1-213ENST00000485080 AHCTF1Q8WYP5 2266 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 ZZEF1O43149 2961 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 SLC5A10A0PJK1 596 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 DXOO77932 396 aaKnown RBP17.38■□□□□ 0.37
SREBF1-213ENST00000485080 PROS1P07225 676 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 MLLT3P42568 568 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-213ENST00000485080 LSSP48449 732 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 INHBCP55103 352 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 ARL4CP56559 192 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 CFHR1Q03591 330 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 TRA2AQ13595 282 aaKnown RBP eCLIP17.38■□□□□ 0.37
SREBF1-213ENST00000485080 FRG1Q14331 258 aaKnown RBP17.38■□□□□ 0.37
SREBF1-213ENST00000485080 CRYMQ14894 314 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 AMZ1Q400G9 498 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 SPANXN3Q5MJ09 141 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 TMEM71Q6P5X7 295 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 ZNF574Q6ZN55 896 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-213ENST00000485080 CENPUQ71F23 418 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 TMPRSS9Q7Z410 1059 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.38■□□□□ 0.37
SREBF1-213ENST00000485080 KIF18AQ8NI77 898 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 CALML6Q8TD86 181 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 BIRC8Q96P09 236 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 STRADBQ9C0K7 418 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 EPB41L5Q9HCM4 733 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 GNPTGQ9UJJ9 305 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 ATXN7L1Q9ULK2 861 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-213ENST00000485080 PSMD13Q9UNM6 376 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 PCDHB1Q9Y5F3 818 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 PCDHGA8Q9Y5G5 932 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 TEX264Q9Y6I9 313 aa17.38■□□□□ 0.37
SREBF1-213ENST00000485080 H3BMM5 538 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 GPC4O75487 556 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 ESR1P03372 595 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 CSF2RBP32927 897 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 LIMK2P53671 638 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 CALCOCO2Q13137 446 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 THOC5Q13769 683 aaKnown RBP17.37■□□□□ 0.37
SREBF1-213ENST00000485080 GPR18Q14330 331 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 BBS9Q3SYG4 887 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 MAP9Q49MG5 647 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 STEAP4Q687X5 459 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 USP53Q70EK8 1073 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 B3GNT8Q7Z7M8 397 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 PDZD3Q86UT5 571 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 ZNF761Q86XN6 746 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-213ENST00000485080 IGDCC3Q8IVU1 814 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 MNS1Q8NEH6 495 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 SPDYE1Q8NFV5 336 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-213ENST00000485080 SEC14L1Q92503 715 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 ELMO1Q92556 727 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 ATXN7L3BQ96GX2 97 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 AHCYL2Q96HN2 611 aaKnown RBP17.37■□□□□ 0.37
SREBF1-213ENST00000485080 C12orf66Q96MD2 445 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 PANX3Q96QZ0 392 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 NUDT22Q9BRQ3 303 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 TRIM31Q9BZY9 425 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 PHACTR1Q9C0D0 580 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 RAB33BQ9H082 229 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 RAB17Q9H0T7 212 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 SYNDIG1Q9H7V2 258 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 POLR1BQ9H9Y6 1135 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 PLAC1Q9HBJ0 212 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 EPHA6Q9UF33 1036 aa17.37■□□□□ 0.37
SREBF1-213ENST00000485080 UTP11Q9Y3A2 253 aaKnown RBP17.37■□□□□ 0.37
SREBF1-213ENST00000485080 COLEC10Q9Y6Z7 277 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms