RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 AADATQ8N5Z0 425 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 ACTRT2Q8TDY3 377 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 FAM131CQ96AQ9 280 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 ZNF514Q96K75 400 aaPredicted RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 KCNK12Q9HB15 430 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 PTBP2Q9UKA9 531 aaKnown RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 COQ6Q9Y2Z9 468 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 PIAS3Q9Y6X2 628 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 NCF1BA6NI72 391 aaPredicted RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 NCF1CA8MVU1 366 aaPredicted RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 MTX2O75431 263 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 GPC4O75487 556 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 ENO1P06733 434 aaKnown RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 C7P10643 843 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 NCF1P14598 390 aaPredicted RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 MAPK9P45984 424 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 MRPS21P82921 87 aaKnown RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 CDC16Q13042 620 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 RPS27LQ71UM5 84 aaKnown RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 RASGEF1AQ8N9B8 481 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 OR56A4Q8NGH8 313 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 CEP70Q8NHQ1 597 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 OR52B2Q96RD2 323 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 MID1IP1Q9NPA3 183 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 PRR5-ARHGAP8B1AHC4 643 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 E2F3O00716 465 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 MBTPS2O43462 519 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 SLCO2B1O94956 709 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 GNAZP19086 355 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 SEC13P55735 322 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 RPS14P62263 151 aaKnown RBP25.76■■□□□ 1.71
SHOX2-204ENST00000483851 ARHGAP8P85298 464 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 GRSF1Q12849 480 aaKnown RBP eCLIP25.76■■□□□ 1.71
SHOX2-204ENST00000483851 PDCD2Q16342 344 aaPredicted RBP25.76■■□□□ 1.71
SHOX2-204ENST00000483851 LSM12Q3MHD2 195 aaKnown RBP25.76■■□□□ 1.71
SHOX2-204ENST00000483851 BCL7AQ4VC05 210 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 RAET1GQ6H3X3 334 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 EFL1Q7Z2Z2 1120 aaKnown RBP25.76■■□□□ 1.71
SHOX2-204ENST00000483851 TRPC4APQ8TEL6 797 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 UBTD2Q8WUN7 234 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 ELMO1Q92556 727 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 SLC12A9Q9BXP2 914 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 TRIM54Q9BYV2 358 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 UTP6Q9NYH9 597 aaKnown RBP25.76■■□□□ 1.71
SHOX2-204ENST00000483851 MBD1Q9UIS9 605 aaPredicted RBP25.76■■□□□ 1.71
SHOX2-204ENST00000483851 SCML1Q9UN30 329 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 C15orf41Q9Y2V0 281 aa25.76■■□□□ 1.71
SHOX2-204ENST00000483851 B2RBV5 119 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 TMEM233B4DJY2 109 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 AZIN1O14977 448 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 EPHA3P29320 983 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 RAP1GDS1P52306 607 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 COPAP53621 1224 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 BTKQ06187 659 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 HSPA14Q0VDF9 509 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 UBAP2LQ14157 1087 aaKnown RBP25.75■■□□□ 1.71
SHOX2-204ENST00000483851 C2orf27AQ580R0 203 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 FBXO27Q8NI29 283 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 CCM2Q9BSQ5 444 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 WDR55Q9H6Y2 383 aaPredicted RBP25.75■■□□□ 1.71
SHOX2-204ENST00000483851 TRIM39Q9HCM9 518 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.75■■□□□ 1.71
SHOX2-204ENST00000483851 MCM8Q9UJA3 840 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 ADAMTS6Q9UKP5 1117 aa25.75■■□□□ 1.71
SHOX2-204ENST00000483851 LRRC14BA6NHZ5 514 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 SDHDO14521 159 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 VEGFDO43915 354 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 TM7SF2O76062 418 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 PKNOX1P55347 436 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 TAS2R38P59533 333 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 UGT3A2Q3SY77 523 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 KANK2Q63ZY3 851 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 ADAMTSL4Q6UY14 1074 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 TCAIMQ8N3R3 496 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 HDDC3Q8N4P3 179 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 IL17RCQ8NAC3 791 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 RBM15BQ8NDT2 890 aaKnown RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 CFAP61Q8NHU2 1237 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 ASB11Q8WXH4 323 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 NSUN5Q96P11 429 aaKnown RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 ZNF382Q96SR6 550 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 HGH1Q9BTY7 390 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 TNFRSF12AQ9NP84 129 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 GOLGA8QA0A0J9YX86 632 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 GOLGA8OA6NCC3 632 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 GOLGA8NF8WBI6 632 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 GIPC1O14908 333 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 ENTPD5O75356 428 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 ESRRBO95718 433 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 EGFP01133 1207 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 NCF2P19878 526 aaPredicted RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 PRDX6P30041 224 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 AGTR2P50052 363 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 TLDC1Q6P9B6 456 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 CPSF7Q8N684 471 aaKnown RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 GLMNQ92990 594 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 PHF7Q9BWX1 381 aaPredicted RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 NUSAP1Q9BXS6 441 aaKnown RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 C1orf21Q9H246 121 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms