RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RAB33BQ9H082 229 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 COG4Q9H9E3 785 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 FBXO8Q9NRD0 319 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 WDR70Q9NW82 654 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 SMARCAL1Q9NZC9 954 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 EPHA6Q9UF33 1036 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-213ENST00000482192 TCAF1Q9Y4C2 921 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 B3GALT1Q9Y5Z6 326 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 CFAP20Q9Y6A4 193 aaKnown RBP11.62□□□□□ -0.55
HMGN1-213ENST00000482192 COLEC10Q9Y6Z7 277 aa11.62□□□□□ -0.55
HMGN1-213ENST00000482192 OR51F1A6NGY5 319 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 KIF5CO60282 957 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 GOT2P00505 430 aaKnown RBP11.61□□□□□ -0.55
HMGN1-213ENST00000482192 FTH1P02794 183 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 NDUFS1P28331 727 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 FOXN2P32314 431 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 KCNJ1P48048 391 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 LEPRP48357 1165 aaKnown RBP11.61□□□□□ -0.55
HMGN1-213ENST00000482192 PRAMEP78395 509 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 CDK16Q00536 496 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 RPA4Q13156 261 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 KRT33BQ14525 404 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 ARHGAP40Q5TG30 622 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 CAPRIN2Q6IMN6 1127 aaKnown RBP11.61□□□□□ -0.55
HMGN1-213ENST00000482192 IRGCQ6NXR0 463 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 DUS1LQ6P1R4 473 aaKnown RBP11.61□□□□□ -0.55
HMGN1-213ENST00000482192 ZNF449Q6P9G9 518 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 CEACAM20Q6UY09 585 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 MICALCLQ6ZW33 695 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 PRSS42Q7Z5A4 293 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 REXO1L1PQ8IX06 675 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 LILRA3Q8N6C8 439 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-213ENST00000482192 HDAC10Q969S8 669 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 SGSM3Q96HU1 749 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 RMDN2Q96LZ7 410 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 ZPBPQ9BS86 351 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 IL22Q9GZX6 179 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 ZNF768Q9H5H4 540 aaKnown RBP11.61□□□□□ -0.55
HMGN1-213ENST00000482192 KIR3DX1Q9H7L2 352 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 SLC2A6Q9UGQ3 507 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 SLC24A2Q9UI40 661 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 HEBP2Q9Y5Z4 205 aa11.61□□□□□ -0.55
HMGN1-213ENST00000482192 OR5K3A6NET4 321 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 F8W8V4 182 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 K7ENP7 123 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 PGRMC1O00264 195 aaKnown RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 IFRD1O00458 451 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 POLR1CO15160 346 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 TPSB2P20231 275 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 CD151P48509 253 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 ATP1A2P50993 1020 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 SESN2P58004 480 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 TPSAB1Q15661 275 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 ZNF658BQ4V348 819 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 FASTKD1Q53R41 847 aaKnown RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 AARS2Q5JTZ9 985 aaKnown RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 PCID2Q5JVF3 399 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 MANEAQ5SRI9 462 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 CACHD1Q5VU97 1274 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 INO80CQ6PI98 192 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 FAM92BQ6ZTR7 304 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 OOSP2Q86WS3 158 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 OR6P1Q8NGX9 317 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 OR4L1Q8NH43 312 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 MAGOHBQ96A72 148 aaKnown RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 MS4A14Q96JA4 679 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 ZNF778Q96MU6 729 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 CTRCQ99895 268 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 OR52A5Q9H2C5 316 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 KCNF1Q9H3M0 494 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 CHRAC1Q9NRG0 131 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 SIDT1Q9NXL6 827 aaKnown RBP11.6□□□□□ -0.55
HMGN1-213ENST00000482192 BFARQ9NZS9 450 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
HMGN1-213ENST00000482192 UNC13CQ8NB66 2214 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 KIF26BQ2KJY2 2108 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 LIN7AO14910 233 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 ATXN7O15265 892 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 KIF1CO43896 1103 aaKnown RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 OR56A5P0C7T3 313 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 PPARGP37231 505 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 NPY2RP49146 381 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 SEPHS1P49903 392 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 SARNPP82979 210 aaKnown RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 RHDQ02161 417 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 FOXM1Q08050 763 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 GPS1Q13098 491 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 IL11RAQ14626 422 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 TRIP13Q15645 432 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 CYP1B1Q16678 543 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 SOWAHCQ53LP3 525 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 DNTTIP2Q5QJE6 756 aaKnown RBP11.59□□□□□ -0.55
HMGN1-213ENST00000482192 ARMC6Q6NXE6 501 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 TTC27Q6P3X3 843 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 LRRC8BQ6P9F7 803 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 CYB5D1Q6P9G0 228 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 ZNF534Q76KX8 674 aa11.59□□□□□ -0.55
HMGN1-213ENST00000482192 SLC35F6Q8N357 371 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms