RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 OR10H2O60403 315 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 C22orf31O95567 290 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 GJA1P17302 382 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 CPT2P23786 658 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 AHRP35869 848 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 PRKAA1Q13131 559 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 HNRNPA0Q13151 305 aaKnown RBP5.43□□□□□ -1.54
SF3B1-210ENST00000482158 RBPMS2Q6ZRY4 209 aaKnown RBP5.43□□□□□ -1.54
SF3B1-210ENST00000482158 NAGSQ8N159 534 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 KBTBD3Q8NAB2 608 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 KCNH5Q8NCM2 988 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 TEKT4Q8WW24 435 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 SEMA4DQ92854 862 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 SPACA9Q96E40 222 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-210ENST00000482158 BAG1Q99933 345 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-210ENST00000482158 DPAGT1Q9H3H5 408 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 ST6GALNAC4Q9H4F1 302 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 EVA1AQ9H8M9 152 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 TRPC7Q9HCX4 862 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 EQTNQ9NQ60 294 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 PRMT7Q9NVM4 692 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-210ENST00000482158 OSER1Q9NX31 292 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 POU2F3Q9UKI9 436 aa5.43□□□□□ -1.54
SF3B1-210ENST00000482158 A0A0B4J293 547 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 A0A0G2JNG1 304 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 H7C0S8 307 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 ACOT8O14734 319 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 XRCC3O43542 346 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 TADA2AO75478 443 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 TFAP2AP05549 437 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 MC5RP33032 325 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 KIR2DS5Q14953 304 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 ASIC2Q16515 512 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 LETM2Q2VYF4 491 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 RNASEH2BQ5TBB1 312 aaKnown RBP5.42□□□□□ -1.54
SF3B1-210ENST00000482158 GRTP1Q5TC63 336 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 SPSB3Q6PJ21 355 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 ZNF771Q7L3S4 317 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-210ENST00000482158 PIWIL4Q7Z3Z4 852 aaKnown RBP5.42□□□□□ -1.54
SF3B1-210ENST00000482158 SLC9B2Q86UD5 537 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 PTOV1Q86YD1 416 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 CEP57L1Q8IYX8 460 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 TSPAN14Q8NG11 270 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 SECTM1Q8WVN6 248 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 ARSGQ96EG1 525 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 MS4A10Q96PG2 267 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 POLR3CQ9BUI4 534 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-210ENST00000482158 ABHD6Q9BV23 337 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 MOV10L1Q9BXT6 1211 aaKnown RBP5.42□□□□□ -1.54
SF3B1-210ENST00000482158 MIOSQ9NXC5 875 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 BCCIPQ9P287 314 aaKnown RBP eCLIP5.42□□□□□ -1.54
SF3B1-210ENST00000482158 CCL27Q9Y4X3 112 aa5.42□□□□□ -1.54
SF3B1-210ENST00000482158 GREB1LQ9C091 1923 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-210ENST00000482158 ANKUB1A6NFN9 424 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 TMEM221A6NGB7 291 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 TCERG1O14776 1098 aaKnown RBP5.41□□□□□ -1.54
SF3B1-210ENST00000482158 GPR137BO60478 399 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 MED24O75448 989 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 SLCO2B1O94956 709 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 TRUB2O95900 331 aaKnown RBP5.41□□□□□ -1.54
SF3B1-210ENST00000482158 LDLRP01130 860 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 LIPFP07098 398 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 KRT19P08727 400 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 DANCRP0C864 163 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 MYBL1P10243 752 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 ZNF23P17027 643 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 MCCP23508 829 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 RAD23AP54725 363 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 NR1D2Q14995 579 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 KLHL26Q53HC5 615 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 C6orf163Q5TEZ5 329 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 IRAK1BP1Q5VVH5 260 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 DGLUCYQ7Z3D6 616 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 TMEM173Q86WV6 379 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-210ENST00000482158 XXYLT1Q8NBI6 393 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 PAPD5Q8NDF8 572 aaKnown RBP5.41□□□□□ -1.54
SF3B1-210ENST00000482158 Q8NFD4 153 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 CNDP2Q96KP4 475 aaKnown RBP5.41□□□□□ -1.54
SF3B1-210ENST00000482158 RABEP2Q9H5N1 569 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 ANKZF1Q9H8Y5 726 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 CFDP1Q9UEE9 299 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-210ENST00000482158 OSGIN1Q9UJX0 560 aa5.41□□□□□ -1.54
SF3B1-210ENST00000482158 A0A1W2PS18 150 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 C15orf62A8K5M9 175 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 BAG4O95429 457 aaKnown RBP5.4□□□□□ -1.54
SF3B1-210ENST00000482158 LINGO3P0C6S8 592 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 CSF2RAP15509 400 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 PFKFB1P16118 471 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 NR1D1P20393 614 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 TCP11X2Q5H9J9 407 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 C1orf141Q5JVX7 400 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 CAPRIN2Q6IMN6 1127 aaKnown RBP5.4□□□□□ -1.54
SF3B1-210ENST00000482158 FOXL2NBQ6ZUU3 175 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 OR6J1Q8NGC5 347 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 MOSPD2Q8NHP6 518 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 DAZLQ92904 295 aaKnown RBP5.4□□□□□ -1.54
SF3B1-210ENST00000482158 NXNL1Q96CM4 212 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 ABHD8Q96I13 439 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 CNOT10Q9H9A5 744 aaKnown RBP5.4□□□□□ -1.54
SF3B1-210ENST00000482158 TBC1D17Q9HA65 648 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms