RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 OR10A4Q9H209 315 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 DUS2Q9NX74 493 aaKnown RBP7.53□□□□□ -1.2
LINC00888-203ENST00000482098 IFNKQ9P0W0 207 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 GCNT4Q9P109 453 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 NTMQ9P121 344 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 TUBGCP4Q9UGJ1 667 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 STEAP1Q9UHE8 339 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 SARDHQ9UL12 918 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 CCL26Q9Y258 94 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 DRG1Q9Y295 367 aaKnown RBP7.53□□□□□ -1.2
LINC00888-203ENST00000482098 GOLGA4Q13439 2230 aaKnown RBP7.53□□□□□ -1.2
LINC00888-203ENST00000482098 KIF26AQ9ULI4 1882 aaPredicted RBP7.53□□□□□ -1.2
LINC00888-203ENST00000482098 ATG2BQ96BY7 2078 aa7.53□□□□□ -1.2
LINC00888-203ENST00000482098 LOC105369274A0A096LPK9 316 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 LOC102723532A0A0G2JNH3 316 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 GOLGA6L10A0A0M3HER8 536 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 GTPBP10A4D1E9 387 aaKnown RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 AGPSO00116 658 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ZNF217O75362 1048 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 WDR47O94967 919 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 HEXIM1O94992 359 aaKnown RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 VNN1O95497 513 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 NFATC1O95644 943 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 GNSP15586 552 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 CHN1P15882 459 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 HTR7P34969 479 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 PPARGP37231 505 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 IFNAR2P48551 515 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 PDE6CP51160 858 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 AFF3P51826 1226 aaKnown RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 CHN2P52757 468 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 CFHR1Q03591 330 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 THOC5Q13769 683 aaKnown RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ZBTB6Q15916 424 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ZNF77Q15935 545 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 DEPDC1Q5TB30 811 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 NAIF1Q69YI7 327 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 KRT39Q6A163 491 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 CCDC144NLQ6NUI1 221 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ATG4DQ86TL0 474 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ZSWIM9Q86XI8 627 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 OR4N4Q8N0Y3 316 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 MAB21L3Q8N8X9 362 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 RFWD2Q8NHY2 731 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 SPPL2BQ8TCT7 592 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 CACTINQ8WUQ7 758 aaKnown RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 RLN3Q8WXF3 142 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ST8SIA2Q92186 375 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 MRPS31Q92665 395 aaKnown RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 C18orf25Q96B23 403 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ZNF419Q96HQ0 510 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 NAP1L5Q96NT1 182 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 CAMK1GQ96NX5 476 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 NR1H4Q96RI1 486 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 HCN3Q9P1Z3 774 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 UXTQ9UBK9 157 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 SIX4Q9UIU6 781 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ITGA11Q9UKX5 1188 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 CORO1CQ9ULV4 474 aaPredicted RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 UBQLN1Q9UMX0 589 aaKnown RBP7.52□□□□□ -1.21
LINC00888-203ENST00000482098 PLXNB3Q9ULL4 1909 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 NOTCH2Q04721 2471 aa7.52□□□□□ -1.21
LINC00888-203ENST00000482098 ZNF638Q14966 1978 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 MYO9AB2RTY4 2548 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 SPTAN1Q13813 2472 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 RRP8O43159 456 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 PGM3O95394 542 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 HLA-DRAP01903 254 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 ITGB3P05106 788 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 TPM3P06753 285 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 OR4Q2P0C623 313 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 HMGA1P17096 107 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 ATF6P18850 670 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 PBX1P40424 430 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 EIF2S3P41091 472 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 OPRD1P41143 372 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 TNFRSF4P43489 277 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 ZNF75DP51815 510 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 RPL7AP62424 266 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 UBXN1Q04323 297 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 SCARB2Q14108 478 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 EXOC3L4Q17RC7 722 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 RNF151Q2KHN1 245 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 IL27RAQ6UWB1 636 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 GBP6Q6ZN66 633 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 TRAPPC11Q7Z392 1133 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 TRMT11Q7Z4G4 463 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 C11orf44Q8N8P7 122 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 IL17RCQ8NAC3 791 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 KCTD6Q8NC69 237 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 FBXL13Q8NEE6 735 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 TNIP2Q8NFZ5 429 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 TAS1R2Q8TE23 839 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 ARRDC3Q96B67 414 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 ERGIC2Q96RQ1 377 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 CRACR2AQ9BSW2 395 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 C12orf65Q9H3J6 166 aaKnown RBP7.51□□□□□ -1.21
LINC00888-203ENST00000482098 RABEP2Q9H5N1 569 aa7.51□□□□□ -1.21
LINC00888-203ENST00000482098 DPP3Q9NY33 737 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms