RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ABHD17AQ96GS6 310 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 SLC41A2Q96JW4 573 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 TBL1YQ9BQ87 522 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 TWSG1Q9GZX9 223 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 EPN3Q9H201 632 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 FAM96AQ9H5X1 160 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 HRASLS2Q9NWW9 162 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 KCND3Q9UK17 655 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 ACSL5Q9ULC5 683 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 PADI1Q9ULC6 663 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 PCDHA3Q9Y5H8 950 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 EPN1Q9Y6I3 576 aaPredicted RBP14.89□□□□□ -0.03
LIMS3-203ENST00000480744 PIPSLA2A3N6 862 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 CCDC66A2RUB6 948 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 OR6C74A6NCV1 312 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 TLCD2A6NGC4 264 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 CCL22O00626 93 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 NTRK1P04629 796 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 PTMAP06454 111 aaKnown RBP14.88□□□□□ -0.03
LIMS3-203ENST00000480744 RALBP11234 206 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 SPTBP11277 2137 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 RWDD2BP57060 319 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 ACY1Q03154 408 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 CRTC2Q53ET0 693 aaPredicted RBP14.88□□□□□ -0.03
LIMS3-203ENST00000480744 LACTB2Q53H82 288 aaPredicted RBP14.88□□□□□ -0.03
LIMS3-203ENST00000480744 COLEC12Q5KU26 742 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 PWWP2BQ6NUJ5 590 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 CFAP206Q8IYR0 622 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 ULK4Q96C45 1275 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 MRFAP1L1Q96HT8 127 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 RMDN2Q96LZ7 410 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 SPATA13Q96N96 652 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 CD180Q99467 661 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 LHX9Q9NQ69 397 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 FGF21Q9NSA1 209 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 SLC24A2Q9UI40 661 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 POLHQ9Y253 713 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 EFR3BQ9Y2G0 817 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 KCNMB2Q9Y691 235 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 DUSP10Q9Y6W6 482 aa14.88□□□□□ -0.03
LIMS3-203ENST00000480744 UBR5O95071 2799 aaPredicted RBP14.88□□□□□ -0.03
LIMS3-203ENST00000480744 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 CFAP99D6REC4 459 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 CREG1O75629 220 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 TJP3O95049 919 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 FURINP09958 794 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 ITGALP20701 1170 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 HSD11B2P80365 405 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 XIAPP98170 497 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 PDE1BQ01064 536 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 GPR19Q15760 415 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 BCL7AQ4VC05 210 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 FBXO38Q6PIJ6 1188 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 TMEM135Q86UB9 458 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 KMT5CQ86Y97 462 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 NXPE1Q8N323 547 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 LILRA3Q8N6C8 439 aaPredicted RBP14.87□□□□□ -0.03
LIMS3-203ENST00000480744 LRRC45Q96CN5 670 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 PANX2Q96RD6 677 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 COPS8Q99627 209 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 KIR3DX1Q9H7L2 352 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 SOHLH2Q9NX45 425 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 SEMA5BQ9P283 1151 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 ANAPC2Q9UJX6 822 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 TP53TG5Q9Y2B4 290 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 COLEC10Q9Y6Z7 277 aa14.87□□□□□ -0.03
LIMS3-203ENST00000480744 TNRC6AQ8NDV7 1962 aaKnown RBP14.87□□□□□ -0.03
LIMS3-203ENST00000480744 HECTD1Q9ULT8 2610 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 KLHL33A6NCF5 533 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 MKRN2OSH3BPM6 223 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 DDX3YO15523 660 aaKnown RBP14.86□□□□□ -0.03
LIMS3-203ENST00000480744 SGTAO43765 313 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 PYGMP11217 842 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 POLR2CP19387 275 aaPredicted RBP14.86□□□□□ -0.03
LIMS3-203ENST00000480744 NR1D1P20393 614 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 MC4RP32245 332 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 PTPN7P35236 360 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 CASRP41180 1078 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 ZNF140P52738 457 aaPredicted RBP14.86□□□□□ -0.03
LIMS3-203ENST00000480744 PRKAA1Q13131 559 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 ZRANB3Q5FWF4 1079 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 TMTC4Q5T4D3 741 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 FAM199XQ6PEV8 388 aaPredicted RBP14.86□□□□□ -0.03
LIMS3-203ENST00000480744 ARHGEF18Q6ZSZ5 1173 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 MICALCLQ6ZW33 695 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 SNX20Q7Z614 316 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 TMTC1Q8IUR5 882 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 TMEM126BQ8IUX1 230 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 ACRBPQ8NEB7 543 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 OR4E2Q8NGC2 313 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 HM13Q8TCT9 377 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 ALG3Q92685 438 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 CALR3Q96L12 384 aaKnown RBP14.86□□□□□ -0.03
LIMS3-203ENST00000480744 PPM1MQ96MI6 270 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 PPP1R2P1Q96PQ5 205 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 RUFY1Q96T51 708 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 ACTL8Q9H568 366 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 MAN2B2Q9Y2E5 1009 aa14.86□□□□□ -0.03
LIMS3-203ENST00000480744 REXO2Q9Y3B8 237 aaKnown RBP14.86□□□□□ -0.03
LIMS3-203ENST00000480744 C21orf140B9A014 251 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms