RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TGIF1Q15583 401 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 LONRF1Q17RB8 773 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 LINC00303Q3SY05 128 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 GPR33Q49SQ1 333 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 PYCR3Q53H96 274 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 SPANXN3Q5MJ09 141 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 KIAA0930Q6ICG6 404 aaPredicted RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 TMEM220Q6QAJ8 160 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 TAF8Q7Z7C8 310 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 TRAPPC5Q8IUR0 188 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 PALM2Q8IXS6 379 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 IFT20Q8IY31 132 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 CLDN19Q8N6F1 224 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 BEND7Q8N7W2 519 aaPredicted RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 KYQ8NBH2 561 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 DDHD1Q8NEL9 900 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 PYROXD1Q8WU10 500 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.91□□□□□ -0.98
VCP-206ENST00000480327 MED8Q96G25 268 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 C9orf72Q96LT7 481 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 OR2M4Q96R27 311 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 COPS8Q99627 209 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 C19orf43Q9BQ61 176 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 PLAC1Q9HBJ0 212 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 PPANQ9NQ55 473 aaKnown RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 IARS2Q9NSE4 1012 aaKnown RBP8.91□□□□□ -0.98
VCP-206ENST00000480327 SMOXQ9NWM0 555 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 ZDHHC3Q9NYG2 299 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 VPS18Q9P253 973 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 SLC17A6Q9P2U8 582 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 SPASTQ9UBP0 616 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 FAM8A1Q9UBU6 413 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 PADI4Q9UM07 663 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 DOLKQ9UPQ8 538 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 FAM169AQ9Y6X4 670 aa8.91□□□□□ -0.98
VCP-206ENST00000480327 CCDC187A0A096LP49 1063 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 AGAP14A8MT82 685 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 NDUFS3O75489 264 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 RALBP11234 206 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 ECHS1P30084 290 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 SSTR1P30872 391 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 CTBSQ01459 385 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 CTBP1Q13363 440 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 INSCQ1MX18 579 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 HSP90AA5PQ58FG0 334 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 NEPROQ6NW34 567 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 TRMT10BQ6PF06 316 aaKnown RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 FOXR1Q6PIV2 292 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 SLC30A9Q6PML9 568 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 TMPRSS9Q7Z410 1059 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 SDCCAG8Q86SQ7 713 aaPredicted RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 LRRTM4Q86VH4 590 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 KCNMB4Q86W47 210 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 DENND6AQ8IWF6 608 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 GSPT2Q8IYD1 628 aaKnown RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 WDR36Q8NI36 951 aaKnown RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 GRAMD1AQ96CP6 724 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 LRRC39Q96DD0 335 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 SCARF2Q96GP6 870 aaPredicted RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 LIN37Q96GY3 246 aaPredicted RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 FMO2Q99518 471 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 TTC1Q99614 292 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 NAT9Q9BTE0 207 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 FOXP3Q9BZS1 431 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 ZCCHC2Q9C0B9 1178 aaKnown RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 OSGEPL1Q9H4B0 414 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 RRAGDQ9NQL2 400 aaPredicted RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 KLC4Q9NSK0 619 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 NCKIPSDQ9NZQ3 722 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 MTRF1LQ9UGC7 380 aaKnown RBP8.9□□□□□ -0.98
VCP-206ENST00000480327 SLC23A2Q9UGH3 650 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 KCNK6Q9Y257 313 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 DNAJC16Q9Y2G8 782 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 ST14Q9Y5Y6 855 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 PRSS21Q9Y6M0 314 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 DGKBQ9Y6T7 804 aa8.9□□□□□ -0.98
VCP-206ENST00000480327 SPTA1P02549 2419 aa8.9□□□□□ -0.99
VCP-206ENST00000480327 UTP20O75691 2785 aaKnown RBP8.9□□□□□ -0.99
VCP-206ENST00000480327 TRBV23OR9-2A0A075B6M9 112 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 UBA6A0AVT1 1052 aaPredicted RBP8.89□□□□□ -0.99
VCP-206ENST00000480327 D6RAR5 112 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 CHUKO15111 745 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 KMOO15229 486 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 EIF3HO15372 352 aaKnown RBP eCLIP8.89□□□□□ -0.99
VCP-206ENST00000480327 SGTAO43765 313 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 SNX2O60749 519 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 POP7O75817 140 aaKnown RBP8.89□□□□□ -0.99
VCP-206ENST00000480327 PIAS1O75925 651 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 TTC4O95801 387 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 ANXA6P08133 673 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 ITGA2BP08514 1039 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 ATP1B2P14415 290 aaPredicted RBP8.89□□□□□ -0.99
VCP-206ENST00000480327 ZNF7P17097 686 aaPredicted RBP8.89□□□□□ -0.99
VCP-206ENST00000480327 ITGB6P18564 788 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 WT1P19544 449 aaPredicted RBP8.89□□□□□ -0.99
VCP-206ENST00000480327 FMO4P31512 558 aa8.89□□□□□ -0.99
VCP-206ENST00000480327 SLC5A2P31639 672 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms