RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MED19A0JLT2 244 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 FAM221BA6H8Z2 402 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 OR52A4PA6NMU1 304 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 IFRD1O00458 451 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 NTN3O00634 580 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 KPNA5O15131 536 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 S1PR4O95977 384 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 RPLP0P05388 317 aaKnown RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 ERVK-10P10266 1014 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 SLC1A2P43004 574 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CD151P48509 253 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 EIF3BP55884 814 aaKnown RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 GPLD1P80108 840 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CTBP1Q13363 440 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 SPIDRQ14159 915 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CLCA4Q14CN2 919 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 FASTKD3Q14CZ7 662 aaKnown RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 RPE65Q16518 533 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CLPPQ16740 277 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 HES3Q5TGS1 186 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CDCP2Q5VXM1 449 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CAPRIN2Q6IMN6 1127 aaKnown RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 XKR5Q6UX68 686 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 KIAA0408Q6ZU52 694 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 SPRED1Q7Z699 444 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 DENND6AQ8IWF6 608 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CNTN4Q8IWV2 1026 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 PALM2Q8IXS6 379 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 UNC5BQ8IZJ1 945 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 LILRA3Q8N6C8 439 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 Q8N9G6 341 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 GSDMBQ8TAX9 411 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 ZFPM2Q8WW38 1151 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 ASZ1Q8WWH4 475 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CFAP36Q96G28 342 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 BIRC8Q96P09 236 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 GFM1Q96RP9 751 aaKnown RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 INSM2Q96T92 566 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 WWP1Q9H0M0 922 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 OR52A5Q9H2C5 316 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 LRRN3Q9H3W5 708 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 UCK1Q9HA47 277 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 PLAC1Q9HBJ0 212 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 SLC40A1Q9NP59 571 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 SAYSD1Q9NPB0 183 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 PPANQ9NQ55 473 aaKnown RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 ZNF624Q9P2J8 865 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 MTRF1LQ9UGC7 380 aaKnown RBP10.6□□□□□ -0.71
ATG4B-219ENST00000479941 FBXO5Q9UKT4 447 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 WASF3Q9UPY6 502 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CLCA2Q9UQC9 943 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CRYL1Q9Y2S2 319 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 HEBP2Q9Y5Z4 205 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 COMMD10Q9Y6G5 202 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 CHD8Q9HCK8 2581 aa10.6□□□□□ -0.71
ATG4B-219ENST00000479941 A0A1W2PQM1 296 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 SLC5A10A0PJK1 596 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 LILRA5A6NI73 299 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 B4GAT1O43505 415 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 HYAL3O43820 417 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 MT-CO3P00414 261 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 MTHFD1P11586 935 aaKnown RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 PKMP14618 531 aaKnown RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 JUPP14923 745 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 AOAHP28039 575 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 NDUFS1P28331 727 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 ALDH4A1P30038 563 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 FMO4P31512 558 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 CCR7P32248 378 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 LEPRP48357 1165 aaKnown RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 CARSP49589 748 aaKnown RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 EPHA4P54764 986 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 OR1D5P58170 312 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 CCL7P80098 99 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 SQSTM1Q13501 440 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 BOP1Q14137 746 aaKnown RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 SYTL3Q4VX76 610 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 ZNF789Q5FWF6 425 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 CTSL3PQ5NE16 218 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 RBM44Q6ZP01 1051 aaKnown RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 TMEM26Q6ZUK4 368 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 CYS1Q717R9 158 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 GALNT7Q86SF2 657 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 CCDC25Q86WR0 208 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 DCBLD1Q8N8Z6 715 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 C2CD4AQ8NCU7 369 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 TMEM159Q96B96 161 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 GRAMD1AQ96CP6 724 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 C12orf66Q96MD2 445 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 DEPDC7Q96QD5 511 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 SCNM1Q9BWG6 230 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 TSPYL1Q9H0U9 437 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 CCDC68Q9H2F9 335 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 EPB41L1Q9H4G0 881 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 FBXO6Q9NRD1 293 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 ZDHHC18Q9NUE0 388 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 IMP3Q9NV31 184 aaKnown RBP10.59□□□□□ -0.71
ATG4B-219ENST00000479941 KCNK4Q9NYG8 393 aa10.59□□□□□ -0.71
ATG4B-219ENST00000479941 MOCS1Q9NZB8 636 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms