RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PADI2Q9Y2J8 665 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 C9J4A7 227 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 AURKAO14965 403 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 IPO13O94829 963 aaKnown RBP16.71■□□□□ 0.27
VIM-204ENST00000478746 IGHEP01854 428 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 POLR2CP19387 275 aaPredicted RBP16.71■□□□□ 0.27
VIM-204ENST00000478746 AGXTP21549 392 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 CDH3P22223 829 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 GRNP28799 593 aaKnown RBP16.71■□□□□ 0.27
VIM-204ENST00000478746 HADHAP40939 763 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 PRKCIP41743 596 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 MYL5Q02045 173 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 ZBTB17Q13105 803 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 SSPNQ14714 243 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 LLGL1Q15334 1064 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.27
VIM-204ENST00000478746 METRNLQ641Q3 311 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 TMEM220Q6QAJ8 160 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 Q6ZS92 163 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 NT5DC3Q86UY8 548 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 RASGEF1AQ8N9B8 481 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 IMP4Q96G21 291 aaKnown RBP16.71■□□□□ 0.27
VIM-204ENST00000478746 C12orf66Q96MD2 445 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 DPH2Q9BQC3 489 aaPredicted RBP16.71■□□□□ 0.27
VIM-204ENST00000478746 ZNF670Q9BS34 389 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 ZCCHC2Q9C0B9 1178 aaKnown RBP16.71■□□□□ 0.27
VIM-204ENST00000478746 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 C1GALT1Q9NS00 363 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 SLC24A2Q9UI40 661 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 OSGIN2Q9Y236 505 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 PCDHGA10Q9Y5H3 936 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 PCSK5Q92824 1860 aa16.71■□□□□ 0.27
VIM-204ENST00000478746 OR2AG2A6NM03 316 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 MYO1FO00160 1098 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 PEX12O00623 359 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 MAP3K7O43318 606 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 LDB2O43679 373 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 SKILP12757 684 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 PBLDP30039 288 aaPredicted RBP16.7■□□□□ 0.26
VIM-204ENST00000478746 GJC1P36383 396 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 PREPP48147 710 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 CTSCP53634 463 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 IFI35P80217 286 aaPredicted RBP16.7■□□□□ 0.26
VIM-204ENST00000478746 PRKAA1Q13131 559 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 PDK2Q15119 407 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 DCAF10Q5QP82 559 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 LDLRAP1Q5SW96 308 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 FAM182AQ5T1J6 154 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 MRGPREQ86SM8 312 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 CUZD1Q86UP6 607 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 KCNMB4Q86W47 210 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 MAP7D3Q8IWC1 876 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 MCEMP1Q8IX19 187 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 PQLC3Q8N755 202 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 BEND7Q8N7W2 519 aaPredicted RBP16.7■□□□□ 0.26
VIM-204ENST00000478746 OR4E2Q8NGC2 313 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 ZNF830Q96NB3 372 aaPredicted RBP16.7■□□□□ 0.26
VIM-204ENST00000478746 DHRS4Q9BTZ2 278 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 WWP1Q9H0M0 922 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 KIR3DX1Q9H7L2 352 aa16.7■□□□□ 0.26
VIM-204ENST00000478746 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 UGT1A9O60656 530 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 KLF7O75840 302 aaPredicted RBP16.69■□□□□ 0.26
VIM-204ENST00000478746 HBQ1P09105 142 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 UGT1A6P19224 532 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 UGT1A1P22309 533 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 UGT1A4P22310 534 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 PPIDQ08752 370 aaKnown RBP16.69■□□□□ 0.26
VIM-204ENST00000478746 ZNF789Q5FWF6 425 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 MLIPQ5VWP3 458 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
VIM-204ENST00000478746 DUS1LQ6P1R4 473 aaKnown RBP16.69■□□□□ 0.26
VIM-204ENST00000478746 SPOCD1Q6ZMY3 1216 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 AGAP3Q96P47 875 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 CEP41Q9BYV8 373 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 SLC25A51Q9H1U9 297 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 UGT1A7Q9HAW7 530 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 UGT1A10Q9HAW8 530 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 UGT1A8Q9HAW9 530 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 IL26Q9NPH9 171 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 SPO11Q9Y5K1 396 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 COLEC10Q9Y6Z7 277 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 ZGRF1Q86YA3 2104 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 F8P00451 2351 aa16.69■□□□□ 0.26
VIM-204ENST00000478746 PRSS44E7EML9 344 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 E7EQ34 232 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 ZNF749O43361 778 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 ZG16O60844 167 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 NDST3O95803 873 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 MSL3P1P0C860 447 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 HLA-DPA1P20036 260 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 HMGCLP35914 325 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 AP1B1Q10567 949 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 KRT33BQ14525 404 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 GSE1Q14687 1217 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 ANO6Q4KMQ2 910 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 ZDHHC20Q5W0Z9 365 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 ZBTB20Q9HC78 741 aaPredicted RBP16.68■□□□□ 0.26
VIM-204ENST00000478746 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms