RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 NELFBQ8WX92 580 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 JPH3Q8WXH2 748 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 ASB12Q8WXK4 309 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 OR1E3Q8WZA6 343 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 ARHGEF2Q92974 986 aaKnown RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 NAT6Q93015 286 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 PDXPQ96GD0 296 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 DHTKD1Q96HY7 919 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 EXOC2Q96KP1 924 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 C1orf74Q96LT6 269 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 TBATAQ96M53 351 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 WDR92Q96MX6 357 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 KLHL32Q96NJ5 620 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 GSDMAQ96QA5 445 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 TRIM62Q9BVG3 475 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 LRRN3Q9H3W5 708 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 WDCPQ9H6R7 721 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 SYNDIG1Q9H7V2 258 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 EPB41L5Q9HCM4 733 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 DYRK4Q9NR20 520 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 SPASTQ9UBP0 616 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 PISDQ9UG56 409 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 IPO11Q9UI26 975 aaKnown RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 DAAM1Q9Y4D1 1078 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 UBE2QL1A1L167 161 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 TMEM202A6NGA9 273 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 MED7O43513 233 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 TSPAN6O43657 245 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SNRNP200O75643 2136 aaKnown RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 PRKCGP05129 697 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 ANXA6P08133 673 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 FAM153BP0C7A2 387 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 VSIG10L2P0DP72 767 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 PON1P27169 355 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 CDH5P33151 784 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 USP8P40818 1118 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SULT1E1P49888 294 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 HK3P52790 923 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 C21orf58P58505 322 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 YPEL5P62699 121 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SLC25A3Q00325 362 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 B4GALNT1Q00973 533 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 DEUP1Q05D60 604 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SLC20A2Q08357 652 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SGCGQ13326 291 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 MORC3Q14149 939 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 HLTFQ14527 1009 aaKnown RBP eCLIP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 C15orf59Q2T9L4 293 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 MYLK3Q32MK0 819 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SLC25A52Q3SY17 297 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 RABL3Q5HYI8 236 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 BRMS1LQ5PSV4 323 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 CERCAMQ5T4B2 595 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 TIGD7Q6NT04 549 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF783Q6ZMS7 281 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 C17orf82Q86X59 251 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 FAM131BQ86XD5 332 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 ARL10Q8N8L6 244 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 USP7Q93009 1102 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SMARCE1Q969G3 411 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 ISG20Q96AZ6 181 aaKnown RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 PPP1R16AQ96I34 528 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 CCDC114Q96M63 670 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 CFAP57Q96MR6 1250 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 GFM1Q96RP9 751 aaKnown RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 PPP1R9BQ96SB3 815 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 WRAP53Q9BUR4 548 aaKnown RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 APOOQ9BUR5 198 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 EDEM3Q9BZQ6 932 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 SLC25A18Q9H1K4 315 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 RDH14Q9HBH5 336 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 FGF22Q9HCT0 170 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 MRPL40Q9NQ50 206 aaKnown RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 RMND1Q9NWS8 449 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 GEMIN8Q9NWZ8 242 aaKnown RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 GPRC5BQ9NZH0 403 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 NCKIPSDQ9NZQ3 722 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 LHX3Q9UBR4 397 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 DNAI1Q9UI46 699 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 APPL1Q9UKG1 709 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 GPR34Q9UPC5 381 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 LOXL2Q9Y4K0 774 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 OR1A2Q9Y585 309 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 HEMK1Q9Y5R4 338 aaPredicted RBP4.59□□□□□ -1.67
CKS1B-207ENST00000477676 RNF215Q9Y6U7 377 aa4.59□□□□□ -1.67
CKS1B-207ENST00000477676 HIVEP1P15822 2718 aa4.59□□□□□ -1.68
CKS1B-207ENST00000477676 K7EM74 188 aa4.58□□□□□ -1.68
CKS1B-207ENST00000477676 NEMP1O14524 444 aa4.58□□□□□ -1.68
CKS1B-207ENST00000477676 PSMA7O14818 248 aa4.58□□□□□ -1.68
CKS1B-207ENST00000477676 DUX1O43812 170 aa4.58□□□□□ -1.68
CKS1B-207ENST00000477676 TM7SF2O76062 418 aa4.58□□□□□ -1.68
CKS1B-207ENST00000477676 TMCC1O94876 653 aa4.58□□□□□ -1.68
CKS1B-207ENST00000477676 PIGNO95427 931 aa4.58□□□□□ -1.68
CKS1B-207ENST00000477676 POP4O95707 220 aaKnown RBP4.58□□□□□ -1.68
CKS1B-207ENST00000477676 GSRP00390 522 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms