RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 LIMK2P53671 638 aa15.04■□□□□ -0
SEC13-215ENST00000477547 DMPKQ09013 629 aa15.04■□□□□ -0
SEC13-215ENST00000477547 FOXC1Q12948 553 aa15.04■□□□□ -0
SEC13-215ENST00000477547 SEPT7Q16181 437 aaKnown RBP15.04■□□□□ -0
SEC13-215ENST00000477547 DEFB133Q30KQ1 61 aa15.04■□□□□ -0
SEC13-215ENST00000477547 FAM45BPQ6NSW5 357 aa15.04■□□□□ -0
SEC13-215ENST00000477547 FAM83HQ6ZRV2 1179 aaPredicted RBP15.04■□□□□ -0
SEC13-215ENST00000477547 KANSL1Q7Z3B3 1105 aa15.04■□□□□ -0
SEC13-215ENST00000477547 NRROSQ86YC3 692 aa15.04■□□□□ -0
SEC13-215ENST00000477547 MREGQ8N565 214 aa15.04■□□□□ -0
SEC13-215ENST00000477547 FAM45AQ8TCE6 357 aa15.04■□□□□ -0
SEC13-215ENST00000477547 SAP25Q8TEE9 199 aa15.04■□□□□ -0
SEC13-215ENST00000477547 KCNJ9Q92806 393 aa15.04■□□□□ -0
SEC13-215ENST00000477547 ELMO2Q96JJ3 720 aa15.04■□□□□ -0
SEC13-215ENST00000477547 MCMBPQ9BTE3 642 aa15.04■□□□□ -0
SEC13-215ENST00000477547 COG4Q9H9E3 785 aa15.04■□□□□ -0
SEC13-215ENST00000477547 SARS2Q9NP81 518 aaKnown RBP15.04■□□□□ -0
SEC13-215ENST00000477547 DNMT3AQ9Y6K1 912 aaPredicted RBP15.04■□□□□ -0
SEC13-215ENST00000477547 IKBKGQ9Y6K9 419 aa15.04■□□□□ -0
SEC13-215ENST00000477547 NEMP2A6NFY4 417 aa15.03■□□□□ -0
SEC13-215ENST00000477547 B4DGG1 531 aa15.03■□□□□ -0
SEC13-215ENST00000477547 LMO7DNF2Z398 122 aa15.03■□□□□ -0
SEC13-215ENST00000477547 CDX4O14627 284 aaPredicted RBP15.03■□□□□ -0
SEC13-215ENST00000477547 PCDHGA12O60330 932 aa15.03■□□□□ -0
SEC13-215ENST00000477547 SNX2O60749 519 aa15.03■□□□□ -0
SEC13-215ENST00000477547 VPS26AO75436 327 aa15.03■□□□□ -0
SEC13-215ENST00000477547 CHRM3P20309 590 aa15.03■□□□□ -0
SEC13-215ENST00000477547 ILF2Q12905 390 aaKnown RBP15.03■□□□□ -0
SEC13-215ENST00000477547 INAVAQ3KP66 663 aa15.03■□□□□ -0
SEC13-215ENST00000477547 UAP1L1Q3KQV9 507 aa15.03■□□□□ -0
SEC13-215ENST00000477547 HECTD2Q5U5R9 776 aa15.03■□□□□ -0
SEC13-215ENST00000477547 NAPRTQ6XQN6 538 aa15.03■□□□□ -0
SEC13-215ENST00000477547 TAOK1Q7L7X3 1001 aa15.03■□□□□ -0
SEC13-215ENST00000477547 PIM3Q86V86 326 aa15.03■□□□□ -0
SEC13-215ENST00000477547 LILRA3Q8N6C8 439 aaPredicted RBP15.03■□□□□ -0
SEC13-215ENST00000477547 SLC44A1Q8WWI5 657 aa15.03■□□□□ -0
SEC13-215ENST00000477547 TMEM121BQ9BXQ6 578 aaPredicted RBP15.03■□□□□ -0
SEC13-215ENST00000477547 TAAR2Q9P1P5 351 aa15.03■□□□□ -0
SEC13-215ENST00000477547 GULP1Q9UBP9 304 aa15.03■□□□□ -0
SEC13-215ENST00000477547 CSNK1G3Q9Y6M4 447 aa15.03■□□□□ -0
SEC13-215ENST00000477547 ANKRD12Q6UB98 2062 aa15.03■□□□□ -0
SEC13-215ENST00000477547 ANKRD11Q6UB99 2663 aaPredicted RBP15.03■□□□□ -0
SEC13-215ENST00000477547 C17orf113A0A1B0GUU1 675 aa15.02■□□□□ -0
SEC13-215ENST00000477547 PRR19A6NJB7 356 aa15.02■□□□□ -0
SEC13-215ENST00000477547 LIN7AO14910 233 aaPredicted RBP15.02■□□□□ -0
SEC13-215ENST00000477547 KCNJ13O60928 360 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SHBGP04278 402 aa15.02■□□□□ -0
SEC13-215ENST00000477547 APOA4P06727 396 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SLC35G4P0C7Q5 338 aa15.02■□□□□ -0
SEC13-215ENST00000477547 ALPPL2P10696 532 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SAT1P21673 171 aa15.02■□□□□ -0
SEC13-215ENST00000477547 IDSP22304 550 aa15.02■□□□□ -0
SEC13-215ENST00000477547 CCR7P32248 378 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SPRP35270 261 aaPredicted RBP15.02■□□□□ -0
SEC13-215ENST00000477547 PREPP48147 710 aa15.02■□□□□ -0
SEC13-215ENST00000477547 NOVA1P51513 510 aaKnown RBP15.02■□□□□ -0
SEC13-215ENST00000477547 CLCNKAP51800 687 aa15.02■□□□□ -0
SEC13-215ENST00000477547 BMPR2Q13873 1038 aa15.02■□□□□ -0
SEC13-215ENST00000477547 ZNF658BQ4V348 819 aaPredicted RBP15.02■□□□□ -0
SEC13-215ENST00000477547 GRTP1Q5TC63 336 aa15.02■□□□□ -0
SEC13-215ENST00000477547 XKR5Q6UX68 686 aa15.02■□□□□ -0
SEC13-215ENST00000477547 OTOAQ7RTW8 1153 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SDR16C5Q8N3Y7 309 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SLC25A45Q8N413 288 aa15.02■□□□□ -0
SEC13-215ENST00000477547 ZBTB2Q8N680 514 aa15.02■□□□□ -0
SEC13-215ENST00000477547 GIMAP7Q8NHV1 300 aa15.02■□□□□ -0
SEC13-215ENST00000477547 GLMNQ92990 594 aa15.02■□□□□ -0
SEC13-215ENST00000477547 TMEM159Q96B96 161 aa15.02■□□□□ -0
SEC13-215ENST00000477547 GPR21Q99679 349 aa15.02■□□□□ -0
SEC13-215ENST00000477547 GPR22Q99680 433 aa15.02■□□□□ -0
SEC13-215ENST00000477547 OLFM1Q99784 485 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
SEC13-215ENST00000477547 NLGN3Q9NZ94 848 aa15.02■□□□□ -0
SEC13-215ENST00000477547 SIRPGQ9P1W8 387 aa15.02■□□□□ -0
SEC13-215ENST00000477547 TBC1D29Q9UFV1 150 aa15.02■□□□□ -0
SEC13-215ENST00000477547 TRMT6Q9UJA5 497 aaKnown RBP15.02■□□□□ -0
SEC13-215ENST00000477547 WASF3Q9UPY6 502 aa15.02■□□□□ -0
SEC13-215ENST00000477547 MED16Q9Y2X0 877 aa15.02■□□□□ -0
SEC13-215ENST00000477547 PCDHGB2Q9Y5G2 931 aa15.02■□□□□ -0
SEC13-215ENST00000477547 WDFY3Q8IZQ1 3526 aa15.02□□□□□ -0.01
SEC13-215ENST00000477547 SRRM3A6NNA2 597 aaPredicted RBP15.01□□□□□ -0.01
SEC13-215ENST00000477547 C4orf47A7E2U8 309 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 KPNA5O15131 536 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 YY2O15391 372 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 FLRT2O43155 660 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 ITGA2BP08514 1039 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 NUDT17P0C025 328 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 FDXRP22570 491 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 AOAHP28039 575 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 MSH2P43246 934 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 GRK6P43250 576 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 SLC12A2P55011 1212 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 CDKN2DP55273 166 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 HSPA14Q0VDF9 509 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 PDAP1Q13442 181 aaKnown RBP15.01□□□□□ -0.01
SEC13-215ENST00000477547 TTLL9Q3SXZ7 439 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 C6orf132Q5T0Z8 1188 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 CFAP206Q8IYR0 622 aa15.01□□□□□ -0.01
SEC13-215ENST00000477547 SIDT2Q8NBJ9 832 aaKnown RBP15.01□□□□□ -0.01
SEC13-215ENST00000477547 FAM46DQ8NEK8 389 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms