RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LMNTD2Q8IXW0 634 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 SDR16C5Q8N3Y7 309 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 PPM1NQ8N819 430 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 FAM181AQ8N9Y4 354 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 SIDT2Q8NBJ9 832 aaKnown RBP15.55■□□□□ 0.08
COPS3-207ENST00000477299 PHC3Q8NDX5 983 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 GIMAP7Q8NHV1 300 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 HM13Q8TCT9 377 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 SCG3Q8WXD2 468 aaKnown RBP15.55■□□□□ 0.08
COPS3-207ENST00000477299 OR52A5Q9H2C5 316 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 TOR4AQ9NXH8 423 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 FTSJ1Q9UET6 329 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 GNPTGQ9UJJ9 305 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 PADI4Q9UM07 663 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 MTO1Q9Y2Z2 717 aaKnown RBP15.55■□□□□ 0.08
COPS3-207ENST00000477299 RNF215Q9Y6U7 377 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 C17orf113A0A1B0GUU1 675 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 KCNK5O95279 499 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 FTH1P02794 183 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 ESR1P03372 595 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 GSTA2P09210 222 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 ALPPL2P10696 532 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 CHRM3P20309 590 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 GMPRP36959 345 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 CD151P48509 253 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 CLCN7P51798 805 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 PMS2P54278 862 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 ADARP55265 1226 aaKnown RBP15.54■□□□□ 0.08
COPS3-207ENST00000477299 HSPA14Q0VDF9 509 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 C14orf28Q4W4Y0 310 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 ABRAXAS1Q6UWZ7 409 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 KIAA0408Q6ZU52 694 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 CYS1Q717R9 158 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 PIM3Q86V86 326 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 ZC3HC1Q86WB0 502 aaKnown RBP15.54■□□□□ 0.08
COPS3-207ENST00000477299 LRRC6Q86X45 466 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 SFRP1Q8N474 314 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 ARL10Q8N8L6 244 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 JPH3Q8WXH2 748 aaPredicted RBP15.54■□□□□ 0.08
COPS3-207ENST00000477299 GPR21Q99679 349 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 OLFM1Q99784 485 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 DUSP23Q9BVJ7 150 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 DLL3Q9NYJ7 618 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 RUVBL2Q9Y230 463 aaKnown RBP15.54■□□□□ 0.08
COPS3-207ENST00000477299 PTPRBP23467 1997 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 SPEGQ15772 3267 aa15.54■□□□□ 0.08
COPS3-207ENST00000477299 RIPK2O43353 540 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 KCNJ13O60928 360 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 GPC4O75487 556 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 CKMT1AP12532 417 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 CKMT2P17540 419 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 VCLP18206 1134 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 CSRP1P21291 193 aaKnown RBP15.53■□□□□ 0.08
COPS3-207ENST00000477299 SAT1P21673 171 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 NOVA1P51513 510 aaKnown RBP15.53■□□□□ 0.08
COPS3-207ENST00000477299 DAB2P98082 770 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 SLMAPQ14BN4 828 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 UAP1Q16222 522 aaPredicted RBP15.53■□□□□ 0.08
COPS3-207ENST00000477299 RPE65Q16518 533 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 ACSBG2Q5FVE4 666 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 HECTD2Q5U5R9 776 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 AGAP9Q5VTM2 703 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 CAPRIN2Q6IMN6 1127 aaKnown RBP15.53■□□□□ 0.08
COPS3-207ENST00000477299 WDR93Q6P2C0 686 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 EFL1Q7Z2Z2 1120 aaKnown RBP15.53■□□□□ 0.08
COPS3-207ENST00000477299 GPATCH11Q8N954 259 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 EIF1ADQ8N9N8 165 aaKnown RBP15.53■□□□□ 0.08
COPS3-207ENST00000477299 AENQ8WTP8 325 aaKnown RBP15.53■□□□□ 0.08
COPS3-207ENST00000477299 FUT8Q9BYC5 575 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 TSPYL1Q9H0U9 437 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 PCDHB1Q9Y5F3 818 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 KIF26BQ2KJY2 2108 aa15.53■□□□□ 0.08
COPS3-207ENST00000477299 PFDN6O15212 129 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 KCNA4P22459 653 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 ACADVLP49748 655 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 UBE2IP63279 158 aaKnown RBP15.52■□□□□ 0.08
COPS3-207ENST00000477299 ABRQ12979 859 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 SLC29A2Q14542 456 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 ZNF460Q14592 562 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 NR0B2Q15466 257 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 TMEM207Q6UWW9 146 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 WASH2PQ6VEQ5 465 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 GALNT7Q86SF2 657 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 SLC26A11Q86WA9 606 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 Q8N9G6 341 aaPredicted RBP15.52■□□□□ 0.08
COPS3-207ENST00000477299 CCDC74AQ96AQ1 378 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 C12orf66Q96MD2 445 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 RTKNQ9BST9 563 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 ACSS3Q9H6R3 686 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 CAB39LQ9H9S4 337 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 WASH6PQ9NQA3 447 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 LATS2Q9NRM7 1088 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 IMP3Q9NV31 184 aaKnown RBP15.52■□□□□ 0.08
COPS3-207ENST00000477299 LRIT1Q9P2V4 623 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 CPNE7Q9UBL6 633 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 CIDEBQ9UHD4 219 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 ACSL5Q9ULC5 683 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 VPS9D1Q9Y2B5 631 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 NFS1Q9Y697 457 aa15.52■□□□□ 0.08
COPS3-207ENST00000477299 DCHS1Q96JQ0 3298 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms