RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 C2P06681 752 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 DDX6P26196 483 aaKnown RBP eCLIP18.35■□□□□ 0.53
VARS2-209ENST00000477288 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 LRRC73Q5JTD7 316 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 ERICH5Q6P6B1 374 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 CIB1Q99828 191 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 TRPV5Q9NQA5 729 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 SLC38A8A6NNN8 435 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 POU2F1P14859 743 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 LIPEQ05469 1076 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 OLFML1Q6UWY5 402 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 ARMC10Q8N2F6 343 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 PIGXQ8TBF5 258 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 FAM110BQ8TC76 370 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 GLTPD2A6NH11 291 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 IFNW1P05000 195 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 C8AP07357 584 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 CCR3P51677 355 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 RABGGTBP53611 331 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 VLDLRP98155 873 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 VARS2Q5ST30 1063 aaKnown RBP18.35■□□□□ 0.53
VARS2-209ENST00000477288 IL23RQ5VWK5 629 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 CERS6Q6ZMG9 384 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 KCTD8Q6ZWB6 473 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 COQ8BQ96D53 544 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 ARL8BQ9NVJ2 186 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 DMTF1Q9Y222 760 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 LRRC10BA6NIK2 292 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 TXNL4AP83876 142 aaKnown RBP18.35■□□□□ 0.53
VARS2-209ENST00000477288 CDKL1Q00532 357 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 ZMYND11Q15326 602 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 PTF1AQ7RTS3 328 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 C9JVG2 144 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 ZNF823P16415 610 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 EFNA1P20827 205 aaPredicted RBP18.34■□□□□ 0.53
VARS2-209ENST00000477288 DRD4P21917 467 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 CCNCP24863 283 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 NRG3P56975 720 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 DPYSQ14117 519 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 GHDCQ8N2G8 530 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 OR2AJ1Q8NGZ0 328 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 PCED1BQ96HM7 432 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 ALG2Q9H553 416 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 CCDC59Q9P031 241 aaKnown RBP18.34■□□□□ 0.53
VARS2-209ENST00000477288 RCCD1A6NED2 376 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 CCKBRP32239 447 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 AHSA2Q719I0 299 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 CLIP4Q8N3C7 705 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 KREMEN2Q8NCW0 462 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 PLD4Q96BZ4 506 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 C12orf66Q96MD2 445 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 COMMD4Q9H0A8 199 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 COMMD3-BMI1R4GMX3 469 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 ELOVL7A1L3X0 281 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 TRIM64A6NGJ6 449 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 TRAFD1O14545 582 aaPredicted RBP18.34■□□□□ 0.53
VARS2-209ENST00000477288 B3GALT2O43825 422 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 YBEYP58557 167 aaPredicted RBP18.34■□□□□ 0.53
VARS2-209ENST00000477288 SIDT2Q8NBJ9 832 aaKnown RBP18.34■□□□□ 0.53
VARS2-209ENST00000477288 KCT2Q8NC54 265 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 SPATA22Q8NHS9 363 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 PIK3R3Q92569 461 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 SLC38A4Q969I6 547 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 PCDHB18PQ96TA0 734 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 RBM4BQ9BQ04 359 aaKnown RBP18.34■□□□□ 0.53
VARS2-209ENST00000477288 RBM4Q9BWF3 364 aaKnown RBP18.34■□□□□ 0.53
VARS2-209ENST00000477288 C12orf4Q9NQ89 552 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 KIF1AQ12756 1690 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 KCNU1A8MYU2 1149 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 UBXN7O94888 489 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 CCNE2O96020 404 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 CHIT1Q13231 466 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 KREMEN1Q96MU8 473 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 FKBP14Q9NWM8 211 aa18.34■□□□□ 0.53
VARS2-209ENST00000477288 GOT2P00505 430 aaKnown RBP18.33■□□□□ 0.53
VARS2-209ENST00000477288 SMPD1P17405 629 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 GBE1Q04446 702 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 LIX1Q8N485 282 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 PHC3Q8NDX5 983 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 HCAR2Q8TDS4 363 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 ELAC1Q9H777 363 aaKnown RBP18.33■□□□□ 0.53
VARS2-209ENST00000477288 SLC30A4O14863 429 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 USP2O75604 605 aaPredicted RBP18.33■□□□□ 0.53
VARS2-209ENST00000477288 C6orf52Q5T4I8 152 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 ALG1LQ6GMV1 187 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.33■□□□□ 0.53
VARS2-209ENST00000477288 ANKRD46Q86W74 232 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 ACBD6Q9BR61 282 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 RCOR3Q9P2K3 495 aaPredicted RBP18.33■□□□□ 0.53
VARS2-209ENST00000477288 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.53
VARS2-209ENST00000477288 CST3P01034 146 aaPredicted RBP18.33■□□□□ 0.52
VARS2-209ENST00000477288 PRH1P02810 166 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 GDF6Q6KF10 455 aaPredicted RBP18.33■□□□□ 0.52
VARS2-209ENST00000477288 SLC26A9Q7LBE3 791 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 RANBP3LQ86VV4 465 aaPredicted RBP18.33■□□□□ 0.52
VARS2-209ENST00000477288 OR51V1Q9H2C8 321 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 TBC1D17Q9HA65 648 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 ABCB8Q9NUT2 735 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 GRIN2DO15399 1336 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms