RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 BBS9Q3SYG4 887 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 MAP9Q49MG5 647 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 KIAA0930Q6ICG6 404 aaPredicted RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 TMEM26Q6ZUK4 368 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 NLRP9Q7RTR0 991 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 TMEM135Q86UB9 458 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 SLC9B2Q86UD5 537 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 CACTIN-AS1Q8N1I8 211 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 OR6C4Q8NGE1 309 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 HM13Q8TCT9 377 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 ZCCHC14Q8WYQ9 949 aaKnown RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 ZNF592Q92610 1267 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 SGSM3Q96HU1 749 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 C12orf66Q96MD2 445 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 PPM1MQ96MI6 270 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 SLC38A3Q99624 504 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 XAB2Q9HCS7 855 aaKnown RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 EVA1BQ9NVM1 165 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 GRHL1Q9NZI5 618 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 KLHL3Q9UH77 587 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 CIDEBQ9UHD4 219 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 CDYLQ9Y232 598 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 MAD1L1Q9Y6D9 718 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 FAM237BA0A1B0GVD1 139 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 SLC5A10A0PJK1 596 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 A8MU76 341 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 EFCAB8A8MWE9 144 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 CFAP99D6REC4 459 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 NIPSNAP2O75323 286 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 TCEA3O75764 348 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 URI1O94763 535 aaPredicted RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 VIPP01282 170 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 RALBP11234 206 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 MTHFD1P11586 935 aaKnown RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 ELK3P41970 407 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 NSG1P42857 185 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 GPR3P46089 330 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 MPP1Q00013 466 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 CTBP1Q13363 440 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 BIRC2Q13490 618 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 BOP1Q14137 746 aaKnown RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 DHX34Q14147 1143 aaKnown RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 RTP5Q14D33 572 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 SNAP47Q5SQN1 464 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 PHF19Q5T6S3 580 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 ZNF549Q6P9A3 640 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 TRMT10BQ6PF06 316 aaKnown RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 FBXO38Q6PIJ6 1188 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 ZNF572Q7Z3I7 529 aaPredicted RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 ANKMY2Q8IV38 441 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 OTUD6BQ8N6M0 293 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 NCSTNQ92542 709 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 ELMO1Q92556 727 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 LPGAT1Q92604 370 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 PEX13Q92968 403 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 CXorf40BQ96DE9 158 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 ZNF514Q96K75 400 aaPredicted RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 BIRC8Q96P09 236 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 SLC30A3Q99726 388 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 ASCL3Q9NQ33 180 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 FBXO6Q9NRD1 293 aaPredicted RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 ZMIZ1Q9ULJ6 1067 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 CHMP2BQ9UQN3 213 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 RUVBL2Q9Y230 463 aaKnown RBP12.15□□□□□ -0.46
APTX-220ENST00000476858 MED16Q9Y2X0 877 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 UNC13CQ8NB66 2214 aa12.15□□□□□ -0.46
APTX-220ENST00000476858 ZFHX4Q86UP3 3567 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 PIKFYVEQ9Y2I7 2098 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 LILRA5A6NI73 299 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 PIAS1O75925 651 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 AP2A2O94973 939 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CPNE6O95741 557 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 S1PR4O95977 384 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 ERVK-10P10266 1014 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 VCLP18206 1134 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 FMO4P31512 558 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CCKBRP32239 447 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 SLC1A2P43004 574 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 EIF3BP55884 814 aaKnown RBP12.14□□□□□ -0.47
APTX-220ENST00000476858 SLC7A5Q01650 507 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 LAMB3Q13751 1172 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CRYMQ14894 314 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 ST3GAL2Q16842 350 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 TYSND1Q2T9J0 566 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
APTX-220ENST00000476858 DUPD1Q68J44 220 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 NEPROQ6NW34 567 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CERS6Q6ZMG9 384 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 PIM3Q86V86 326 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 HOOK3Q86VS8 718 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 TRIM48Q8IWZ4 208 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 NOA1Q8NC60 698 aaKnown RBP12.14□□□□□ -0.47
APTX-220ENST00000476858 LRRN4CLQ8ND94 238 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 OR5AR1Q8NGP9 310 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms