RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 NOL11Q9H8H0 719 aaKnown RBP9.65□□□□□ -0.86
USP39-214ENST00000474572 SPAG4Q9NPE6 437 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 GIMAP2Q9UG22 337 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 TRPS1Q9UHF7 1281 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 RIMS3Q9UJD0 308 aa9.65□□□□□ -0.86
USP39-214ENST00000474572 A0A1W2PP18 115 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 TCRBV3S1A0A5B6 114 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 DYTNA2CJ06 578 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 ASPDHA6ND91 283 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 PRORSD1PA6NEY8 169 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 K7EPI3 171 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 SGTAO43765 313 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 CRCPO75575 148 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 AP2A2O94973 939 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 TRIM16O95361 564 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 BAG2O95816 211 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 CAPN1P07384 714 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 CTSLP07711 333 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 EBLN1P0CF75 366 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 TIMP2P16035 220 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 SYN1P17600 705 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 ITGB6P18564 788 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 NFKBIAP25963 317 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 CCR7P32248 378 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 RECQLP46063 649 aaPredicted RBP9.64□□□□□ -0.87
USP39-214ENST00000474572 PIK3CGP48736 1102 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 ERFP50548 548 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 DIO3P55073 304 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 EMX2Q04743 252 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 SP140Q13342 867 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 ARHGEF7Q14155 803 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 ADGRE1Q14246 886 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 C18orf21Q32NC0 220 aaPredicted RBP9.64□□□□□ -0.87
USP39-214ENST00000474572 EML3Q32P44 896 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 C6orf10Q5SRN2 563 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 HENMT1Q5T8I9 393 aaKnown RBP9.64□□□□□ -0.87
USP39-214ENST00000474572 IZUMO2Q6UXV1 221 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 TECPR1Q7Z6L1 1165 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 TCAIMQ8N3R3 496 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 SFRP1Q8N474 314 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 TRAM1L1Q8N609 369 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 PAF1Q8N7H5 531 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 DNAJC5GQ8N7S2 189 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 CDYL2Q8N8U2 506 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 SNX31Q8N9S9 440 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 BHLHE22Q8NFJ8 381 aaPredicted RBP9.64□□□□□ -0.87
USP39-214ENST00000474572 N4BP2L2Q92802 583 aaPredicted RBP9.64□□□□□ -0.87
USP39-214ENST00000474572 TIFAQ96CG3 184 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 LRRC3BQ96PB8 259 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 VPS35Q96QK1 796 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 MTIF3Q9H2K0 278 aaKnown RBP9.64□□□□□ -0.87
USP39-214ENST00000474572 NSUN3Q9H649 340 aaKnown RBP9.64□□□□□ -0.87
USP39-214ENST00000474572 ASIC5Q9NY37 505 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 SUN2Q9UH99 717 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 IL36AQ9UHA7 158 aa9.64□□□□□ -0.87
USP39-214ENST00000474572 LRRK1Q38SD2 2015 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SERTM1A2A2V5 107 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 A8MX80 341 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 TTC34A8MYJ7 566 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 NPIPB8E9PQR5 432 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 GFYI3L273 518 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 PSMD11O00231 422 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 QSOX1O00391 747 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 NR5A2O00482 541 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 NME4O00746 187 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ANKRD28O15084 1053 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 LSM1O15116 133 aaKnown RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 KPNA5O15131 536 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 EEDO75530 441 aaKnown RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 LEFTY1O75610 366 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 NPPAP01160 153 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 C8GP07360 202 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ANXA5P08758 320 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 PIM1P11309 404 aaPredicted RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 ADH5P11766 374 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 HSD17B1P14061 328 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ATP1B2P14415 290 aaPredicted RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 EPORP19235 508 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 NNMTP40261 264 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SLC6A12P48065 614 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 HSPA7P48741 367 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 DGKGP49619 791 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 CLNS1AP54105 237 aaKnown RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 MRPS22P82650 360 aaKnown RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 MRPS35P82673 323 aaKnown RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 RHDQ02161 417 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SEMG2Q02383 582 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 TLR1Q15399 786 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 GGTA1PQ4G0N0 100 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SFT2D3Q587I9 215 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ZNF805Q5CZA5 627 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 PRR23BQ6ZRT6 265 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 LRRC70Q7Z2Q7 622 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 TRIM46Q7Z4K8 759 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 HSD11B1LQ7Z5J1 315 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ZFAND4Q86XD8 727 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 KLHDC8AQ8IYD2 350 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 GOLM1Q8NBJ4 401 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ITFG1Q8TB96 612 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms