RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NOD2Q9HC29 1040 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 PRMT8Q9NR22 394 aaPredicted RBP6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 DIABLOQ9NR28 239 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 TDP1Q9NUW8 608 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 NDE1Q9NXR1 346 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 ZDHHC3Q9NYG2 299 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 HSF4Q9ULV5 492 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 PLCL2Q9UPR0 1127 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 HIF3AQ9Y2N7 669 aa6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 WBP11Q9Y2W2 641 aaKnown RBP6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 NOC2LQ9Y3T9 749 aaKnown RBP6.01□□□□□ -1.45
SMARCE1-208ENST00000474246 DNAH12Q6ZR08 3092 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 A0A1B0GTH6 734 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 MEI4A8MW99 385 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 C1QTNF9BB2RNN3 333 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF701M0R085 212 aaPredicted RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 ARVCFO00192 962 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 EREGO14944 169 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 PHGDHO43175 533 aaKnown RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 ZSCAN12O43309 604 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 ASNA1O43681 348 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 LPXNO60711 386 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 TBX19O60806 448 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 B4GALT2O60909 372 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 NDUFS6O75380 124 aaKnown RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 SCGB2A1O75556 95 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 AKAP3O75969 853 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 POMCP01189 267 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 IL1BP01584 269 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 STSP08842 583 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 TFPTP0C1Z6 253 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 C1QTNF9P0C862 333 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 CD40LGP29965 261 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 TGM3Q08188 693 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 IFFO1Q0D2I5 559 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 NAB1Q13506 487 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 TUBB3Q13509 450 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 UAP1Q16222 522 aaPredicted RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 HSDL1Q3SXM5 330 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 CDKL4Q5MAI5 379 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 DCST1Q5T197 706 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 CCNJQ5T5M9 372 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 HES5Q5TA89 166 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 AGBL2Q5U5Z8 902 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 RAET1GQ6H3X3 334 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 INO80CQ6PI98 192 aaPredicted RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 C4orf22Q6V702 233 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 PAGE2Q7Z2X7 111 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 FAM228AQ86W67 206 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 ADGRF2Q8IZF7 708 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 GALNT4Q8N4A0 578 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 OR13C3Q8NGS6 347 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 NDNFQ8TB73 568 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF596Q8TC21 504 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 MCOLN3Q8TDD5 553 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 CKAP2Q8WWK9 683 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 HTR3CQ8WXA8 447 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 RLN3Q8WXF3 142 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 ZNF317Q96PQ6 595 aaPredicted RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 FERMT1Q9BQL6 677 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 SLC25A23Q9BV35 468 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 RTN4RQ9BZR6 473 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 TMEM168Q9H0V1 697 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 NAPBQ9H115 298 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 PABPC3Q9H361 631 aaKnown RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 CATSPERBQ9H7T0 1116 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 C20orf96Q9NUD7 363 aaPredicted RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 EXD2Q9NVH0 621 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 RBAKQ9NYW8 714 aaPredicted RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 BTBD7Q9P203 1132 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 MGAT4CQ9UBM8 478 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 ENPP5Q9UJA9 477 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 CDH7Q9ULB5 785 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 AP4E1Q9UPM8 1137 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 EIF3LQ9Y262 564 aaKnown RBP6□□□□□ -1.45
SMARCE1-208ENST00000474246 TRAF6Q9Y4K3 522 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 HEY1Q9Y5J3 304 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 V9GYQ6 96 aa6□□□□□ -1.45
SMARCE1-208ENST00000474246 A0A0U1RQS6 177 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 NR5A2O00482 541 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 GNB5O14775 395 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 KCNQ3O43525 872 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 DLX3O60479 287 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 PAGE1O75459 146 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 GMNNO75496 209 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ZFPL1O95159 310 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 KAT7O95251 611 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 HTR3BO95264 441 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 ABHD2P08910 425 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 COX5BP10606 129 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CETPP11597 493 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CPA3P15088 417 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 TCF4P15884 667 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 GSTM2P28161 218 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 HOXA13P31271 388 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 APOBEC3AP31941 199 aaPredicted RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 GGT5P36269 586 aa5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 FEN1P39748 380 aaKnown RBP5.99□□□□□ -1.45
SMARCE1-208ENST00000474246 CSNK1DP48730 415 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms