RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CD86P42081 329 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 HALP42357 657 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ARL4DP49703 201 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ARSEP51690 589 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 KPNA2P52292 529 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 RRADP55042 308 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 PER3P56645 1201 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 UBXN1Q04323 297 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 DMPKQ09013 629 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ELOAQ14241 798 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 BECN1Q14457 450 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 MYBPC3Q14896 1274 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 NCF4Q15080 339 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 PAFAH1B3Q15102 231 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 PLCL1Q15111 1095 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 RPE65Q16518 533 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 IFI16Q16666 785 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 ATP13A5Q4VNC0 1218 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF789Q5FWF6 425 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 E4F1Q66K89 784 aaPredicted RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 TIGD7Q6NT04 549 aaPredicted RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 IGFL3Q6UXB1 125 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 FAM83HQ6ZRV2 1179 aaPredicted RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 APTXQ7Z2E3 356 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF571Q7Z3V5 609 aaPredicted RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 TMC3Q7Z5M5 1100 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 MRGPREQ86SM8 312 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 SYTL1Q8IYJ3 562 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 CARFQ8N187 725 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 NIPA2Q8N8Q9 360 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ST6GALNAC3Q8NDV1 305 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 FAM71BQ8TC56 605 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 LRRN4Q8WUT4 740 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 UBE2Q2Q8WVN8 375 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ITPKCQ96DU7 683 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 PPM1MQ96MI6 270 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 VPS35Q96QK1 796 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 TLR10Q9BXR5 811 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ADGRE3Q9BY15 652 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 UNKQ9C0B0 810 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 NUP62CLQ9H1M0 184 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 RAD18Q9NS91 495 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 PCMTD2Q9NV79 361 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 HAUS2Q9NVX0 235 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 FANCLQ9NW38 375 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 HRASLS2Q9NWW9 162 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 MYO1AQ9UBC5 1043 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 LIMA1Q9UHB6 759 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 MYO6Q9UM54 1294 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 SHOC2Q9UQ13 582 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 BTRCQ9Y297 605 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF711Q9Y462 761 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 COPG1Q9Y678 874 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 PIKFYVEQ9Y2I7 2098 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 SPG11Q96JI7 2443 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 LRRC10BA6NIK2 292 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 LRRC53A6NM62 1247 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 F5H423 210 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 KCNK1O00180 336 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 AURKAO14965 403 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 DDX3YO15523 660 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 LRRTM2O43300 516 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 KCNJ13O60928 360 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 POP7O75817 140 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 KLF7O75840 302 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 LCA5LO95447 670 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ALPPP05187 535 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 VSIG8P0DPA2 414 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 MYBL1P10243 752 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 MTHFD1P11586 935 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 OTX2P32243 289 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CA5AP35218 305 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 PRKCIP41743 596 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ARCN1P48444 511 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CTSCP53634 463 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 IFI35P80217 286 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 GBE1Q04446 702 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM115Q12893 351 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC10A2Q12908 348 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZBTB17Q13105 803 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 DPYSL3Q14195 570 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 PIGHQ14442 188 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 NFE2L1Q14494 772 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 KRT81Q14533 505 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZRSR2Q15696 482 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 KYNUQ16719 465 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZXDCQ2QGD7 858 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 PTCHD3Q3KNS1 767 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 DCAF10Q5QP82 559 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CCDC122Q5T0U0 273 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 FAM182AQ5T1J6 154 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 TMTC4Q5T4D3 741 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CCDC183Q5T5S1 534 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 LYPLAL1Q5VWZ2 237 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF385CQ66K41 422 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 DUS1LQ6P1R4 473 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 FBXO38Q6PIJ6 1188 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 SPOCD1Q6ZMY3 1216 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 Q6ZS92 163 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms