RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 TBC1D3EA0A087X179 549 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TBC1D3KA0A087X1G2 549 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 A0A1W2PQU0 124 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 SLC5A10A0PJK1 596 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TBC1D3FA6NER0 549 aaPredicted RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 C19orf67A6NJJ6 358 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TBC1D3LB9A6J9 549 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 K7ESM1 405 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 LIN7AO14910 233 aaPredicted RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 FFAR2O15552 330 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 MTX2O75431 263 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 SUPT7LO94864 414 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 IGLV3-19P01714 112 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 S100BP04271 92 aaPredicted RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 FGF4P08620 206 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 RPS17P08708 135 aaKnown RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 HOXC4P09017 264 aaPredicted RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 TBC1D3HP0C7X1 549 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 GABRG2P18507 467 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 NDUFV2P19404 249 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 ARRB2P32121 409 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TRIM23P36406 574 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 CTSCP53634 463 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 CDK3Q00526 305 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 HSPA14Q0VDF9 509 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 IFT88Q13099 833 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 SETDB1Q15047 1291 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 PCBP2Q15366 365 aaKnown RBP eCLIP9.92□□□□□ -0.82
APTX-217ENST00000473221 PPP1R3AQ16821 1122 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TBC1D3GQ6DHY5 549 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TBC1D3CQ6IPX1 549 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 ATG14Q6ZNE5 492 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 FRMD7Q6ZUT3 714 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 DET1Q7L5Y6 550 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TRPM8Q7Z2W7 1104 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 CACUL1Q86Y37 369 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 RASGRP3Q8IV61 690 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TBC1D3Q8IZP1 549 aaPredicted RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 LSMEM2Q8N112 164 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 PELI3Q8N2H9 469 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TCAIMQ8N3R3 496 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 AFAP1L2Q8N4X5 818 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 ZNF781Q8N8C0 355 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 DENND6BQ8NEG7 585 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 OR2T34Q8NGX1 318 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 RFWD2Q8NHY2 731 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TMEM159Q96B96 161 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 ERLEC1Q96DZ1 483 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 PHF21BQ96EK2 531 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 TMEM120AQ9BXJ8 343 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 SLC12A9Q9BXP2 914 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 WWP1Q9H0M0 922 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 GSTO2Q9H4Y5 243 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 RMI1Q9H9A7 625 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 LMAN1LQ9HAT1 526 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 CYP4F12Q9HCS2 524 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 PHPT1Q9NRX4 125 aaPredicted RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 PNPOQ9NVS9 261 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 DNAJC28Q9NX36 388 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 CD274Q9NZQ7 290 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 ATXN10Q9UBB4 475 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 DCTN4Q9UJW0 460 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 NDRG2Q9UN36 371 aaKnown RBP9.92□□□□□ -0.82
APTX-217ENST00000473221 CDYLQ9Y232 598 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 STK38LQ9Y2H1 464 aa9.92□□□□□ -0.82
APTX-217ENST00000473221 PTPRZ1P23471 2315 aaPredicted RBP9.91□□□□□ -0.82
APTX-217ENST00000473221 A0A0G2JND7 137 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 TCRBV21S2A2A0A5A6 115 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 KANSL1LA0AUZ9 987 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 LRRC72A6NJI9 287 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 OR2AG2A6NM03 316 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 C10orf142B7Z368 130 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 GFYI3L273 518 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 MATN2O00339 956 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 ZNF195O14628 629 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 CHUKO15111 745 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 KCNJ13O60928 360 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 LILRB5O75023 590 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 PAK4O96013 591 aaPredicted RBP9.91□□□□□ -0.82
APTX-217ENST00000473221 PCCBP05166 539 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 CHRNGP07510 517 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 HIST1H2AGP0C0S8 130 aaPredicted RBP9.91□□□□□ -0.82
APTX-217ENST00000473221 VCLP18206 1134 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 HIST1H2ADP20671 130 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 CYP2A7P20853 494 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 CD72P21854 359 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 OXTRP30559 389 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 HK3P52790 923 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 AQP5P55064 265 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 AP1S2P56377 157 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 ZP2Q05996 745 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 BOP1Q14137 746 aaKnown RBP9.91□□□□□ -0.82
APTX-217ENST00000473221 IRF4Q15306 451 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 ZNF658BQ4V348 819 aaPredicted RBP9.91□□□□□ -0.82
APTX-217ENST00000473221 ZNF648Q5T619 568 aaPredicted RBP9.91□□□□□ -0.82
APTX-217ENST00000473221 SEL1L3Q68CR1 1132 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 SULT1C3Q6IMI6 304 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 KIAA1324Q6UXG2 1013 aaKnown RBP9.91□□□□□ -0.82
APTX-217ENST00000473221 TRIM69Q86WT6 500 aa9.91□□□□□ -0.82
APTX-217ENST00000473221 HEATR4Q86WZ0 1026 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms