RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 PDE1BQ01064 536 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 BCL7AQ4VC05 210 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 ANKRD20A2Q5SQ80 823 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 ANKRD20A1Q5TYW2 823 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 ANKRD20A3Q5VUR7 823 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 PWWP2BQ6NUJ5 590 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 RANBP10Q6VN20 620 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 TP53TG5Q9Y2B4 290 aa19.29■□□□□ 0.68
COL9A3-210ENST00000472880 PIPSLA2A3N6 862 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 KCNN4O15554 427 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 CREG1O75629 220 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 RFPL1O75677 317 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 IPO7O95373 1038 aaKnown RBP19.28■□□□□ 0.68
COL9A3-210ENST00000472880 FURINP09958 794 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 RBP3P10745 1247 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 ADRA1AP35348 466 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 OLIG2Q13516 323 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 KRT33BQ14525 404 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 GSE1Q14687 1217 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 DARS2Q6PI48 645 aaKnown RBP19.28■□□□□ 0.68
COL9A3-210ENST00000472880 SPDYE1Q8NFV5 336 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-210ENST00000472880 NAT14Q8WUY8 206 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 ZFPM2Q8WW38 1151 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 ULK4Q96C45 1275 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 LRRC45Q96CN5 670 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 CALR3Q96L12 384 aaKnown RBP19.28■□□□□ 0.68
COL9A3-210ENST00000472880 PPP1R2P1Q96PQ5 205 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 OSBPL8Q9BZF1 889 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 RBSNQ9H1K0 784 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 KIR3DX1Q9H7L2 352 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 SLC24A2Q9UI40 661 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 MAN2B2Q9Y2E5 1009 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 EFR3BQ9Y2G0 817 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 PCDHA3Q9Y5H8 950 aa19.28■□□□□ 0.68
COL9A3-210ENST00000472880 OR6C74A6NCV1 312 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 CFAP99D6REC4 459 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 CPNE3O75131 537 aaKnown RBP19.27■□□□□ 0.68
COL9A3-210ENST00000472880 ZBTB11O95625 1053 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-210ENST00000472880 NTRK1P04629 796 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 POLBP06746 335 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 ITGALP20701 1170 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 NDUFS1P28331 727 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 PTPN7P35236 360 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 CETN2P41208 172 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 NAP1L1P55209 391 aaKnown RBP19.27■□□□□ 0.68
COL9A3-210ENST00000472880 KLRB1Q12918 225 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 TMTC4Q5T4D3 741 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 CERS6Q6ZMG9 384 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 D2HGDHQ8N465 521 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 OR13C4Q8NGS5 318 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 HM13Q8TCT9 377 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 SEC14L1Q92503 715 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 COL26A1Q96A83 441 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 LINC00615Q96LM1 132 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-210ENST00000472880 RMDN2Q96LZ7 410 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 FAM118BQ9BPY3 351 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 ACTL8Q9H568 366 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 SOHLH2Q9NX45 425 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 HEBP2Q9Y5Z4 205 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 COLEC10Q9Y6Z7 277 aa19.27■□□□□ 0.68
COL9A3-210ENST00000472880 CCDC66A2RUB6 948 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 RECKO95980 971 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 HADHAP40939 763 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 PRLHRP49683 370 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 ZNF140P52738 457 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-210ENST00000472880 PMS2P54278 862 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 RWDD2BP57060 319 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 TUBB4BP68371 445 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 FOXK1P85037 733 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 TMPRSS15P98073 1019 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 XIAPP98170 497 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 PRKAA1Q13131 559 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 TUBB2AQ13885 445 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 TMEM135Q86UB9 458 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 TMEM126BQ8IUX1 230 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 CFAP206Q8IYR0 622 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 CARFQ8N187 725 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 NXPE1Q8N323 547 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 CCDC110Q8TBZ0 833 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 SPATA13Q96N96 652 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 COPS8Q99627 209 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 TBL1YQ9BQ87 522 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 CCM2Q9BSQ5 444 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 TUBB2BQ9BVA1 445 aa19.26■□□□□ 0.67
COL9A3-210ENST00000472880 SGTAO43765 313 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 SCRG1O75711 98 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 ZNF189O75820 626 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-210ENST00000472880 TJP3O95049 919 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 NR1D1P20393 614 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 ARCN1P48444 511 aaKnown RBP19.25■□□□□ 0.67
COL9A3-210ENST00000472880 GPR19Q15760 415 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 TCTN3Q6NUS6 607 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 SNX20Q7Z614 316 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 OR8K5Q8NH50 307 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 HEXDCQ8WVB3 486 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 GPR87Q9BY21 358 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 FANCEQ9HB96 536 aa19.25■□□□□ 0.67
COL9A3-210ENST00000472880 FEZ2Q9UHY8 353 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-210ENST00000472880 SOWAHDA6NJG2 315 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 AGAP14A8MT82 685 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms