RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 PRAMEF17Q5VTA0 474 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 AGAP7PQ5VUJ5 663 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 MLIPQ5VWP3 458 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 ZDHHC20Q5W0Z9 365 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 CCDC70Q6NSX1 233 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 RPTNQ6XPR3 784 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 BNC2Q6ZN30 1099 aaPredicted RBP13.56□□□□□ -0.24
SMURF1-203ENST00000472627 ARRDC2Q8TBH0 407 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 DNAJB14Q8TBM8 379 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 RELTQ969Z4 430 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 CNDP1Q96KN2 507 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 AGAP4Q96P64 663 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 PSMD13Q9UNM6 376 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 SHOC2Q9UQ13 582 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 DNMT3AQ9Y6K1 912 aaPredicted RBP13.56□□□□□ -0.24
SMURF1-203ENST00000472627 AP1M2Q9Y6Q5 423 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 COLEC10Q9Y6Z7 277 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 HIVEP1P15822 2718 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 KLHL33A6NCF5 533 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 GADD45BO75293 160 aaPredicted RBP13.55□□□□□ -0.24
SMURF1-203ENST00000472627 POP7O75817 140 aaKnown RBP13.55□□□□□ -0.24
SMURF1-203ENST00000472627 KLF7O75840 302 aaPredicted RBP13.55□□□□□ -0.24
SMURF1-203ENST00000472627 HLA-DQB2P05538 268 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 SLC35G4P0C7Q5 338 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 MYBL1P10243 752 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 BPIP17213 487 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 CAPN3P20807 821 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 HTR1EP28566 365 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 CA5AP35218 305 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 ANO6Q4KMQ2 910 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 C11orf96Q7Z7L8 435 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF808Q8N4W9 903 aaPredicted RBP13.55□□□□□ -0.24
SMURF1-203ENST00000472627 OR2Y1Q8NGV0 311 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 OR1L3Q8NH93 324 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 PROKR1Q8TCW9 393 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 NACC2Q96BF6 587 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 PTERQ96BW5 349 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 VPS50Q96JG6 964 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 TSGA13Q96PP4 275 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 PCDH18Q9HCL0 1135 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 DTLQ9NZJ0 730 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 POMT2Q9UKY4 750 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF711Q9Y462 761 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 CCDC168Q8NDH2 2452 aa13.55□□□□□ -0.24
SMURF1-203ENST00000472627 GSAPA4D1B5 854 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF749O43361 778 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 MFSD11O43934 449 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 JRKO75564 520 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 LCA5LO95447 670 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 SNRPB2P08579 225 aaKnown RBP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 RARAP10276 462 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 KPNA2P52292 529 aaKnown RBP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 OTUD4Q01804 1114 aaKnown RBP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 NIPAL4Q0D2K0 466 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 GSE1Q14687 1217 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 KRT31Q15323 416 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 HIF1AQ16665 826 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF630Q2M218 657 aaPredicted RBP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 LDLRAP1Q5SW96 308 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 HOOK3Q86VS8 718 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 C12orf66Q96MD2 445 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF830Q96NB3 372 aaPredicted RBP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 SLX1AQ9BQ83 275 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 AP1M1Q9BXS5 423 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 KIR3DX1Q9H7L2 352 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 TAS2R14Q9NYV8 317 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 IFT80Q9P2H3 777 aaPredicted RBP13.54□□□□□ -0.24
SMURF1-203ENST00000472627 SLC24A2Q9UI40 661 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 ACSL5Q9ULC5 683 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 HEBP2Q9Y5Z4 205 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 CSMD2Q7Z408 3487 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 PIKFYVEQ9Y2I7 2098 aa13.54□□□□□ -0.24
SMURF1-203ENST00000472627 NF1P21359 2839 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 CCDC66A2RUB6 948 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 AGPSO00116 658 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 PYGMP11217 842 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 POLR2CP19387 275 aaPredicted RBP13.53□□□□□ -0.24
SMURF1-203ENST00000472627 IL1R2P27930 398 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 TNNT3P45378 269 aaPredicted RBP13.53□□□□□ -0.24
SMURF1-203ENST00000472627 UBE2HP62256 183 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 DCDP81605 110 aaKnown RBP13.53□□□□□ -0.24
SMURF1-203ENST00000472627 BECN1Q14457 450 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 IHHQ14623 411 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 ASIC2Q16515 512 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 LONRF2Q1L5Z9 754 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.53□□□□□ -0.24
SMURF1-203ENST00000472627 KHDC1Q4VXA5 237 aaKnown RBP13.53□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 MRGPRGQ86SM5 289 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 CCNYQ8ND76 341 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 EID2BQ96D98 161 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 TRIM7Q9C029 511 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
SMURF1-203ENST00000472627 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms