RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 LOXL2Q9Y4K0 774 aa3.51□□□□□ -1.85
XRN1-209ENST00000472625 MYOFQ9NZM1 2061 aa3.51□□□□□ -1.85
XRN1-209ENST00000472625 MYH10P35580 1976 aa3.51□□□□□ -1.85
XRN1-209ENST00000472625 PLXNB3Q9ULL4 1909 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 COL6A6A6NMZ7 2263 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 KNTC1P50748 2209 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GOLGA4Q13439 2230 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 MYO18BQ8IUG5 2567 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 A0A0D9SEW6 157 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 LY6G6EA0A0G2JKS1 128 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TSPAN11A1L157 253 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 POM121BA6NF01 834 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 IGLON5A6NGN9 336 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 RHPN2P1A8MT19 583 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 YY2O15391 372 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 SMAD6O43541 496 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 BUB1O43683 1085 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 KDELR3O43731 214 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 KDM1AO60341 852 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 SNAP91O60641 907 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ZNF821O75541 412 aaPredicted RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 GRAP2O75791 330 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ZMPSTE24O75844 475 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 CNTN5O94779 1100 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TMCC1O94876 653 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 APOL3O95236 402 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 MT-CO1P00395 513 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TNFP01375 233 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PRKCGP05129 697 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 CALB1P05937 261 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 HOXC4P09017 264 aaPredicted RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 ELFN1P0C7U0 828 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GIMD1P0DJR0 217 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 VSIG10L2P0DP72 767 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 SLC2A4P14672 509 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 CYP11B1P15538 503 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TSHRP16473 764 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 EEF1GP26641 437 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 SLC5A2P31639 672 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 CSTF2P33240 577 aaKnown RBP eCLIP3.5□□□□□ -1.85
XRN1-209ENST00000472625 LSP1P33241 339 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 UGT1A5P35504 534 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 HSPA9P38646 679 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 RPS19P39019 145 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 STAT1P42224 750 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PTPN9P43378 593 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 KIR2DL3P43628 341 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GPR3P46089 330 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 CCR10P46092 362 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 NSFP46459 744 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 RENBPP51606 427 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PDX1P52945 283 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 METAP1P53582 386 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GSCP56915 257 aaPredicted RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 RNASE9P60153 205 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 SRP54P61011 504 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 AP1S1P61966 158 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ARF5P84085 180 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 LY6DQ14210 128 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GRM7Q14831 915 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TAF5Q15542 800 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 MYLK3Q32MK0 819 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 LSM12Q3MHD2 195 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 TMEM52BQ4KMG9 183 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ATP13A4Q4VNC1 1196 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 C14orf28Q4W4Y0 310 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ALFQ53S48 1182 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ZNF542PQ5EBM4 170 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 CT83Q5H943 113 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 MIIPQ5JXC2 388 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 FNDC7Q5VTL7 733 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PCSK4Q6UW60 755 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 LINGO4Q6UY18 593 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 FRMD7Q6ZUT3 714 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ESPNLQ6ZVH7 1005 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PIM3Q86V86 326 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 VPS36Q86VN1 386 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 FAM131BQ86XD5 332 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 RAVER1Q8IY67 606 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 DRC7Q8IY82 874 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 FAM71AQ8IYT1 594 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 UNC5BQ8IZJ1 945 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 NDUFAF2Q8N183 169 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 RTL3Q8N8U3 475 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 MLKLQ8NB16 471 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 OR56A4Q8NGH8 313 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 KLK6Q92876 244 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 KAT5Q92993 513 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GFM2Q969S9 779 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 CENPTQ96BT3 561 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 MYEOVQ96EZ4 313 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 HMCESQ96FZ2 354 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 BMFQ96LC9 184 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PLEKHG4BQ96PX9 1271 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TBCBQ99426 244 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 KLF6Q99612 283 aaPredicted RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 DDA1Q9BW61 102 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GSDMCQ9BYG8 508 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TM6SF2Q9BZW4 377 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 TTYH3Q9C0H2 523 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms