RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 STMN4Q9H169 189 aaPredicted RBP18.83■□□□□ 0.61
PSPC1-203ENST00000471658 IGSF5Q9NSI5 407 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 RUVBL2Q9Y230 463 aaKnown RBP18.83■□□□□ 0.61
PSPC1-203ENST00000471658 A0A087X1B8 175 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 PRR5-ARHGAP8B1AHC4 643 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 APOA4P06727 396 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 JUNDP17535 347 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 GBX1Q14549 363 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 SYTL3Q4VX76 610 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 C16orf46Q6P387 395 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 CYHR1Q6ZMK1 362 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 NRROSQ86YC3 692 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 BANPQ8N9N5 519 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 ASZ1Q8WWH4 475 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 SMC6Q96SB8 1091 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 TIMM29Q9BSF4 260 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 SMOC1Q9H4F8 434 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 SYTL2Q9HCH5 934 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-203ENST00000471658 KLHL42Q9P2K6 505 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 SUSD2Q9UGT4 822 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 KNL1Q8NG31 2342 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 DMDP11532 3685 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 BRAFP15056 766 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 CTSKP43235 329 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 IL2P60568 153 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 TTLL9Q3SXZ7 439 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 TBC1D1Q86TI0 1168 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-203ENST00000471658 NKAPQ8N5F7 415 aaKnown RBP18.82■□□□□ 0.6
PSPC1-203ENST00000471658 SKA1Q96BD8 255 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 GPR78Q96P69 363 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 ARRDC1-AS1Q9H2J1 176 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 OSGEPL1Q9H4B0 414 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 PSMD13Q9UNM6 376 aa18.82■□□□□ 0.6
PSPC1-203ENST00000471658 LRP4O75096 1905 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 PRR19A6NJB7 356 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 HMGB1P1B2RPK0 211 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-203ENST00000471658 DLL1O00548 723 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 COPEO14579 308 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 LIN7AO14910 233 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-203ENST00000471658 KPNA5O15131 536 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 SLCO2B1O94956 709 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 CSF2P04141 144 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 CFIP05156 583 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 CD1DP15813 335 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 DGKAP23743 735 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 RPL10P27635 214 aaKnown RBP18.81■□□□□ 0.6
PSPC1-203ENST00000471658 GLRBP48167 497 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 MPP2Q14168 576 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 SEPT7Q16181 437 aaKnown RBP18.81■□□□□ 0.6
PSPC1-203ENST00000471658 METRNLQ641Q3 311 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 CUL9Q8IWT3 2517 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 SPDYE1Q8NFV5 336 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-203ENST00000471658 TMEM159Q96B96 161 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 CABS1Q96KC9 395 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 TRNAU1APQ9NX07 287 aaKnown RBP18.81■□□□□ 0.6
PSPC1-203ENST00000471658 TMEM216Q9P0N5 145 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 SENP1Q9P0U3 644 aa18.81■□□□□ 0.6
PSPC1-203ENST00000471658 APOBEC3BQ9UH17 382 aaKnown RBP18.81■□□□□ 0.6
PSPC1-203ENST00000471658 FANCMQ8IYD8 2048 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 CDC7O00311 574 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 ZBTB14O43829 449 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 TYROBPO43914 113 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 SNX2O60749 519 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 KLHL2O95198 593 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 EML2O95834 649 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 GSTM1P09488 218 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 LTA4HP09960 611 aaKnown RBP18.8■□□□□ 0.6
PSPC1-203ENST00000471658 GSTM4Q03013 218 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 DMPKQ09013 629 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 ABRQ12979 859 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 DUOXA1Q1HG43 343 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 HSP90B2PQ58FF3 399 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 PRRT3Q5FWE3 981 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 ZC3H14Q6PJT7 736 aaKnown RBP18.8■□□□□ 0.6
PSPC1-203ENST00000471658 SLC30A9Q6PML9 568 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 CNPY4Q8N129 248 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 PTERQ96BW5 349 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 LRRC61Q9BV99 259 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 KCNK9Q9NPC2 374 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 WDR37Q9Y2I8 494 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 ACTL7BQ9Y614 415 aa18.8■□□□□ 0.6
PSPC1-203ENST00000471658 EPN2O95208 641 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 CTSEP14091 401 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 NME1P15531 152 aaKnown RBP18.79■□□□□ 0.6
PSPC1-203ENST00000471658 HPDP32754 393 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-203ENST00000471658 CRHR1P34998 444 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 ACTR1BP42025 376 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 KCNC1P48547 511 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 RGS4P49798 205 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 ACTR1AP61163 376 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 SLC22A15Q8IZD6 547 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 GPBAR1Q8TDU6 330 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 SKA2Q8WVK7 121 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-203ENST00000471658 GLMNQ92990 594 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 PDLIM5Q96HC4 596 aaKnown RBP18.79■□□□□ 0.6
PSPC1-203ENST00000471658 APOPT1Q96IL0 206 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 DERL2Q9GZP9 239 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 WWP1Q9H0M0 922 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 OR52A5Q9H2C5 316 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms