RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PGRMC2O15173 223 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 AP5Z1O43299 807 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 OR10H2O60403 315 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 CNOT3O75175 753 aaKnown RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 PRKCGP05129 697 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 OR2T7P0C7T2 308 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 UROSP10746 265 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 GAP43P17677 238 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 LBPP18428 481 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 ITIH1P19827 911 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 CD22P20273 847 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 TIA1P31483 386 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMC5-202ENST00000471372 FASLGP48023 281 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 RFX5P48382 616 aaPredicted RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 ALDH7A1P49419 539 aaKnown RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 RASSF2P50749 326 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 SLC10A2Q12908 348 aaPredicted RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 TRAF1Q13077 416 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 HNF4GQ14541 408 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 UGCGQ16739 394 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 TWISTNBQ3B726 338 aaPredicted RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 WASHC2DQ5SRD0 308 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 LDLRAD3Q86YD5 345 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 ERC1Q8IUD2 1116 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 SLC5A8Q8N695 610 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 TRIML1Q8N9V2 468 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 SLC44A1Q8WWI5 657 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 DPF1Q92782 380 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 BSCL2Q96G97 398 aaPredicted RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 SFXN2Q96NB2 322 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 ZNF582Q96NG8 517 aaPredicted RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 LRFN5Q96NI6 719 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 CMKLR1Q99788 373 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 ISCUQ9H1K1 167 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 SEMA6AQ9H2E6 1030 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 TNMDQ9H2S6 317 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 FN3KQ9H479 309 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 LMAN1LQ9HAT1 526 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 TBC1D7Q9P0N9 293 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 CPSF3Q9UKF6 684 aaKnown RBP6.46□□□□□ -1.38
SMC5-202ENST00000471372 PAM16Q9Y3D7 125 aa6.46□□□□□ -1.38
SMC5-202ENST00000471372 ZMYM2Q9UBW7 1377 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 TMEM272A0A1B0GTI8 110 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 PRSS51A0A1B0GVH4 220 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 YDJCA8MPS7 323 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 MS4A18H0YCH9 400 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 SOCS6O14544 535 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 ASAP2O43150 1006 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 RAMP2O60895 175 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 PPFIA2O75334 1257 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 NME6O75414 186 aaPredicted RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 NDUFB8O95169 186 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 PTMAP06454 111 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 PCP11498 1178 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 ACAT1P24752 427 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 CD27P26842 260 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 RPL3P39023 403 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 NT5C2P49902 561 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 GMPSP49915 693 aaPredicted RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 SNU13P55769 128 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 ZP1P60852 638 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 GPR18Q14330 331 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 CTF1Q16619 201 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 ODF3L2Q3SX64 289 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 KBTBD12Q3ZCT8 623 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 TTC31Q49AM3 519 aaPredicted RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 CLYBLQ8N0X4 340 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 PAPD5Q8NDF8 572 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 SPATA33Q96N06 139 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 PRAM1Q96QH2 718 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 PKP4Q99569 1192 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 GTPBP2Q9BX10 602 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 SLA2Q9H6Q3 261 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 NOX4Q9NPH5 578 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 DNAJC17Q9NVM6 304 aaKnown RBP6.45□□□□□ -1.38
SMC5-202ENST00000471372 FETUBQ9UGM5 382 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 LOXL2Q9Y4K0 774 aa6.45□□□□□ -1.38
SMC5-202ENST00000471372 A0A1W2PP11 408 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 OR2M5A3KFT3 312 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 VEGFDO43915 354 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 BCAS2O75934 225 aaPredicted RBP6.44□□□□□ -1.38
SMC5-202ENST00000471372 SOAT1P35610 550 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 ASCL1P50553 236 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 SETMARQ53H47 684 aaPredicted RBP6.44□□□□□ -1.38
SMC5-202ENST00000471372 WDR73Q6P4I2 378 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 BRAT1Q6PJG6 821 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 CRIP3Q6Q6R5 217 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 TMPRSS11FQ6ZWK6 438 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 RABEPKQ7Z6M1 372 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 GPR180Q86V85 440 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 CHERPQ8IWX8 916 aaKnown RBP6.44□□□□□ -1.38
SMC5-202ENST00000471372 NEXN-AS1Q8NBZ9 246 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 OR5R1Q8NH85 324 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 ST7LQ8TDW4 575 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 RAD54LQ92698 747 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 RUNDC3BQ96NL0 473 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 FSD1Q9BTV5 496 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 CATSPERBQ9H7T0 1116 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 HHATLQ9HCP6 504 aa6.44□□□□□ -1.38
SMC5-202ENST00000471372 ADARB2Q9NS39 739 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms