RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 BNIP1Q12981 228 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 TBCCQ15814 346 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 PHKG1Q16816 387 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 WSCD2Q2TBF2 565 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 ZNF658BQ4V348 819 aaPredicted RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 SH2D4BQ5SQS7 431 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 SULT1C3Q6IMI6 304 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 NEK5Q6P3R8 708 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 MTDHQ86UE4 582 aaKnown RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 TRIM74Q86UV6 250 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 HEATR4Q86WZ0 1026 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 RASGRP3Q8IV61 690 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 BEND7Q8N7W2 519 aaPredicted RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 TP53I13Q8NBR0 393 aaPredicted RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 PLA2G15Q8NCC3 412 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 GANCQ8TET4 914 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 ASB12Q8WXK4 309 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 PPM1EQ8WY54 764 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 SIPA1Q96FS4 1042 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 MRGPRX1Q96LB2 322 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 CCM2Q9BSQ5 444 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 C1QTNF7Q9BXJ2 289 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 TEX101Q9BY14 249 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 SLC6A17Q9H1V8 727 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 UTP6Q9NYH9 597 aaKnown RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 ATXN10Q9UBB4 475 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 ZDHHC2Q9UIJ5 367 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 GPR34Q9UPC5 381 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 ZFR2Q9UPR6 939 aaKnown RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 STK38LQ9Y2H1 464 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 A0A1W2PQU0 124 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TCRBV21S2A2A0A5A6 115 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SLC5A10A0PJK1 596 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TMEM202A6NGA9 273 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 LRRC14BA6NHZ5 514 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TMEM233B4DJY2 109 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 GFYI3L273 518 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 E2F3O00716 465 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 LIN7AO14910 233 aaPredicted RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 HGSO14964 777 aaPredicted RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 CHUKO15111 745 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 DIAPH2O60879 1101 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 RNGTTO60942 597 aaKnown RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 PCCBP05166 539 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 FGF4P08620 206 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 IL9P15248 144 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 NDUFV2P19404 249 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 CYP2A7P20853 494 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 INHBCP55103 352 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 CDH13P55290 713 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 AP1S2P56377 157 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 CDK3Q00526 305 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 PLOD1Q02809 727 aaPredicted RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 PRKCQQ04759 706 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 CLCQ05315 142 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 IRF4Q15306 451 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SPRED3Q2MJR0 410 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 VWA5B1Q5TIE3 1220 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 METTL21CQ5VZV1 264 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 KANK2Q63ZY3 851 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TTC23LQ6PF05 361 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TMEM220Q6QAJ8 160 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 ZNF852Q6ZMS4 543 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 UBE2R2Q712K3 238 aaPredicted RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 RPS27LQ71UM5 84 aaKnown RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 HORMAD1Q86X24 394 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TRAPPC5Q8IUR0 188 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 VRK3Q8IV63 474 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SLC22A15Q8IZD6 547 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 ZNF687Q8N1G0 1237 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TCAIMQ8N3R3 496 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SYNPOQ8N3V7 929 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 OR14C36Q8NHC7 312 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 MAPK15Q8TD08 544 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 AGAP11Q8TF27 550 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 ASB11Q8WXH4 323 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TMEM159Q96B96 161 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 RHBDF1Q96CC6 855 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 MAELQ96JY0 434 aaKnown RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 RILPQ96NA2 401 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 LENG8Q96PV6 779 aaPredicted RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 CCDC28BQ9BUN5 200 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SLC12A9Q9BXP2 914 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SLC17A9Q9BYT1 436 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SHCBP1LQ9BZQ2 653 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 NMUR2Q9GZQ4 415 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 OR2AG1Q9H205 316 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 WDR26Q9H7D7 661 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 MID1IP1Q9NPA3 183 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 SAR1AQ9NR31 198 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 TXLNGQ9NUQ3 528 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 EIF2B4Q9UI10 523 aaKnown RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 PTBP2Q9UKA9 531 aaKnown RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 SORCS3Q9UPU3 1222 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 NCKAP1Q9Y2A7 1128 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 RRP15Q9Y3B9 282 aaKnown RBP9.2□□□□□ -0.94
VPS52-216ENST00000471309 PIKFYVEQ9Y2I7 2098 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms