RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 SIGLEC6O43699 453 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 SH3BP5O60239 455 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 NOBOXO60393 691 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 FOXD2O60548 495 aaPredicted RBP14.49□□□□□ -0.09
COL9A3-209ENST00000469852 CHRM3P20309 590 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 GP5P40197 560 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 SLC14A1Q13336 389 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 NAB1Q13506 487 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 BMPR2Q13873 1038 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 CLCA4Q14CN2 919 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 C6orf132Q5T0Z8 1188 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 HECTD2Q5U5R9 776 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 NAXDQ8IW45 347 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 KYQ8NBH2 561 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 CD200R1Q8TD46 325 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 DCAKDQ8WVC6 231 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 SLC44A1Q8WWI5 657 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 KCNJ9Q92806 393 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 ELMO2Q96JJ3 720 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 RMDN2Q96LZ7 410 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 GPR21Q99679 349 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 WWP1Q9H0M0 922 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 OR52A5Q9H2C5 316 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 DPEP2Q9H4A9 486 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 CAB39LQ9H9S4 337 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 DOLKQ9UPQ8 538 aa14.49□□□□□ -0.09
COL9A3-209ENST00000469852 COL5A1P20908 1838 aaPredicted RBP14.48□□□□□ -0.09
COL9A3-209ENST00000469852 PRAMEF33A0A0G2JMD5 474 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 NEMP2A6NFY4 417 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 OR52A4PA6NMU1 304 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 PDZK1P1A8MUH7 402 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 E5RI56 91 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 POC1B-GALNT4F8VUJ3 575 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 H3BMM5 538 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 TPP1O14773 563 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 GPC4O75487 556 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 VCLP18206 1134 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 SAT1P21673 171 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 IDSP22304 550 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 FDXRP22570 491 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 LIMK2P53671 638 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 MAZP56270 477 aaKnown RBP14.48□□□□□ -0.09
COL9A3-209ENST00000469852 HSPA14Q0VDF9 509 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 GBX1Q14549 363 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 ZNF460Q14592 562 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 KLHL38Q2WGJ6 581 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 GRTP1Q5TC63 336 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 DUS1LQ6P1R4 473 aaKnown RBP14.48□□□□□ -0.09
COL9A3-209ENST00000469852 OGFOD3Q6PK18 319 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 LVRNQ6Q4G3 990 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 CEP97Q8IW35 865 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 SLC35F3Q8IY50 421 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 SDR16C5Q8N3Y7 309 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 OR2W6PQ8NHA6 318 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 ZDHHC1Q8WTX9 485 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 PANX3Q96QZ0 392 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 GPR22Q99680 433 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 DHRS4Q9BTZ2 278 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 CCDC68Q9H2F9 335 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 LATS2Q9NRM7 1088 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 TXNDC16Q9P2K2 825 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 TSR3Q9UJK0 312 aaKnown RBP14.48□□□□□ -0.09
COL9A3-209ENST00000469852 PCOLCE2Q9UKZ9 415 aa14.48□□□□□ -0.09
COL9A3-209ENST00000469852 CFAP20Q9Y6A4 193 aaKnown RBP14.48□□□□□ -0.09
COL9A3-209ENST00000469852 EXOC1LA0A1B0GW35 172 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 LIN7AO14910 233 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-209ENST00000469852 FLRT2O43155 660 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 KCNJ13O60928 360 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 CBFA2T3O75081 653 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 TUBBP07437 444 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 GSTM1P09488 218 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 F3P13726 295 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 GMPRP36959 345 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 GRK6P43250 576 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 LIMK1P53667 647 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 TAS2R39P59534 338 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 GSTM4Q03013 218 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 SUZ12Q15022 739 aaKnown RBP14.47□□□□□ -0.09
COL9A3-209ENST00000469852 PROX2Q3B8N5 592 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 SYTL3Q4VX76 610 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 ACSBG2Q5FVE4 666 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 FAM45BPQ6NSW5 357 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 IYDQ6PHW0 289 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 TMEM207Q6UWW9 146 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 ABRAXAS1Q6UWZ7 409 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 OTOAQ7RTW8 1153 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 PIP4P1Q86T03 277 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 C17orf82Q86X59 251 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-209ENST00000469852 MREGQ8N565 214 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 ZBTB2Q8N680 514 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 GPR156Q8NFN8 814 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 BAHD1Q8TBE0 780 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-209ENST00000469852 FAM45AQ8TCE6 357 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 RHBDD1Q8TEB9 315 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 SLC37A2Q8TED4 501 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 SETD7Q8WTS6 366 aaKnown RBP14.47□□□□□ -0.09
COL9A3-209ENST00000469852 APOLD1Q96LR9 279 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 INSM2Q96T92 566 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-209ENST00000469852 TSSK1BQ9BXA7 367 aa14.47□□□□□ -0.09
COL9A3-209ENST00000469852 ZNF624Q9P2J8 865 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms