RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 HCFC1P51610 2035 aa5.17□□□□□ -1.58
PTPN4-209ENST00000469511 MAP1AP78559 2803 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CCP110O43303 1012 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 KLF4O43474 513 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CNOT3O75175 753 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SCRG1O75711 98 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CLDN7O95471 211 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 PEX11BO96011 259 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CPP00450 1065 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 MT-ND3P03897 115 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 PGRP06401 933 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 STSP08842 583 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CYP11B1P15538 503 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ZNF8P17098 575 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 BPIP17213 487 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CHRNB2P17787 502 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 XRCC1P18887 633 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 IL4RP24394 825 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 RPL10P27635 214 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 TEAD1P28347 426 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 HTR1EP28566 365 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SDC4P31431 198 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 OTX2P32243 289 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 PREPP48147 710 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ARCN1P48444 511 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 VAV2P52735 878 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 DRG2P55039 364 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 KRT85P78386 507 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 OGDHQ02218 1023 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 DPTQ07507 201 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ABRQ12979 859 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 PAK1Q13153 545 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ART3Q13508 389 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 GPR18Q14330 331 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 GRM3Q14832 879 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ZNF630Q2M218 657 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 PARP15Q460N3 678 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ACBD5Q5T8D3 534 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 LRRC66Q68CR7 880 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 FAM198BQ6UWH4 519 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 IGFL3Q6UXB1 125 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 NCCRP1Q6ZVX7 275 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 PRSS42Q7Z5A4 293 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SLFN11Q7Z7L1 901 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 LSRQ86X29 649 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CREBRFQ8IUR6 639 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 MCATQ8IVS2 390 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 MRPL41Q8IXM3 137 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 DSELQ8IZU8 1212 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 C19orf47Q8N9M1 422 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SIDT2Q8NBJ9 832 aaKnown RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CATSPER1Q8NEC5 780 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 GPR150Q8NGU9 434 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 NRGNQ92686 78 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 NTAN1Q96AB6 310 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SH3KBP1Q96B97 665 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ZNF501Q96CX3 271 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ANAPC16Q96DE5 110 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SCRN2Q96FV2 425 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CCDC120Q96HB5 630 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 DHTKD1Q96HY7 919 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 GSDMAQ96QA5 445 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 PCDHB18PQ96TA0 734 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 TM9SF2Q99805 663 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 C11orf70Q9BRQ4 267 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 CINPQ9BW66 212 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ILKAPQ9H0C8 392 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-209ENST00000469511 OSGEPL1Q9H4B0 414 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SEMA3GQ9NS98 782 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 FGF21Q9NSA1 209 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 KLC4Q9NSK0 619 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SEMA5BQ9P283 1151 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 ATXN10Q9UBB4 475 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 APEX2Q9UBZ4 518 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 FZD10Q9ULW2 581 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 SNX7Q9UNH6 387 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 DNAJC16Q9Y2G8 782 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 WDR37Q9Y2I8 494 aa5.16□□□□□ -1.58
PTPN4-209ENST00000469511 FN1P02751 2386 aaKnown RBP5.15□□□□□ -1.58
PTPN4-209ENST00000469511 JMJD1CQ15652 2540 aa5.15□□□□□ -1.58
PTPN4-209ENST00000469511 KIR2DS5A0A0G2JLQ3 304 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 A0A0G2JNG1 304 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 HEATR9A2RTY3 570 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 SLC22A31A6NKX4 558 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 KIR2DS3K7RE56 304 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 DFFAO00273 331 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 BIN1O00499 593 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 GRID2O43424 1007 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 NUAK1O60285 661 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 DNAJA2O60884 412 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 MTX2O75431 263 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 KLF7O75840 302 aaPredicted RBP5.15□□□□□ -1.59
PTPN4-209ENST00000469511 PGLSO95336 258 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 VIPP01282 170 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 CYP2A6P11509 494 aaPredicted RBP5.15□□□□□ -1.59
PTPN4-209ENST00000469511 COX6B1P14854 86 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 RORAP35398 523 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 PTPN9P43378 593 aa5.15□□□□□ -1.59
PTPN4-209ENST00000469511 CAPZBP47756 277 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms