RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CADM2Q8N3J6 435 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LIX1Q8N485 282 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PPM1NQ8N819 430 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LMO3Q8TAP4 145 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLC22A8Q8TCC7 542 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LRRC15Q8TF66 581 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZFPM2Q8WW38 1151 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLC13A3Q8WWT9 602 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLC7A6Q92536 515 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LPGAT1Q92604 370 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 HTRA1Q92743 480 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SNAPC3Q92966 411 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PTP4A1Q93096 173 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TESCQ96BS2 214 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RCN3Q96D15 328 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 NXPE2Q96DL1 559 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZHX1-C8orf76Q96EF9 292 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ST6GAL2Q96JF0 529 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ART5Q96L15 291 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SIGLEC10Q96LC7 697 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PPP3R2Q96LZ3 170 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CLUHP3Q96NS8 147 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 NT5C1BQ96P26 610 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 MCMBPQ9BTE3 642 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 KATNAL1Q9BW62 490 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF518BQ9C0D4 1074 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PITHD1Q9GZP4 211 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 IL22Q9GZX6 179 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLC22A4Q9H015 551 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF385DQ9H6B1 395 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RANBP3Q9H6Z4 567 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TRIM45Q9H8W5 580 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LRRC4Q9HBW1 653 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ALG13Q9NP73 1137 aaKnown RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 FANCFQ9NPI8 374 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 IFT46Q9NQC8 304 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 DYRK4Q9NR20 520 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 PCDHB16Q9NRJ7 776 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ABCB10Q9NRK6 738 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TAS2R14Q9NYV8 317 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 NYAP2Q9P242 653 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 TMEM181Q9P2C4 612 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLC9A2Q9UBY0 812 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 MARCOQ9UEW3 520 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 FBXO40Q9UH90 709 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 DNPEPQ9ULA0 475 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 RAB23Q9ULC3 237 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 STUB1Q9UNE7 303 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 FAM50BQ9Y247 325 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLC45A1Q9Y2W3 748 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 COQ4Q9Y3A0 265 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 MTF2Q9Y483 593 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-207ENST00000468925 ORC6Q9Y5N6 252 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 SLX4Q8IY92 1834 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 NUP188Q5SRE5 1749 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 LOXHD1Q8IVV2 1947 aa4.8□□□□□ -1.64
SF3B1-207ENST00000468925 CNTNAP4Q9C0A0 1308 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 A0A075B6Q4 140 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 hCG_1818297A0A087WSY0 165 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 MYOCOSA0A1B0GUC4 107 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 FAM92AA1XBS5 289 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SH3D21A4FU49 640 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 KRT87PA6NCN2 255 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CCDC182A6NF36 153 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF98A6NK75 572 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PRR33A8MZF0 331 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 UPK3BL1B0FP48 263 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 UPK3BL2E5RIL1 263 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 F8W036 122 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 APOC4-APOC2K7ER74 178 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 UBXN8O00124 270 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 WRBO00258 174 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SOCS2O14508 198 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CTDSP2O14595 271 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 MUSKO15146 869 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CFLARO15519 480 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PRPSAP2O60256 369 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PTP4A3O75365 173 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CYP7B1O75881 506 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CABYRO75952 493 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 OR2B3O76000 313 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ALDH1A2O94788 518 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 RHOBTB1O94844 696 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 GCNT3O95395 438 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PIGNO95427 931 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 LSM8O95777 96 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 F9P00740 461 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 APOC2P02655 101 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 IFNA4P05014 189 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CYP2C8P10632 490 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 UNGP13051 313 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 PDGFRAP16234 1089 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 CKMT2P17540 419 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TFE3P19532 575 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 TPSB2P20231 275 aa4.79□□□□□ -1.64
SF3B1-207ENST00000468925 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
SF3B1-207ENST00000468925 ZP3P21754 424 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms