RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 A6NHS1 94 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 OR2AG2A6NM03 316 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 ZSCAN12O43309 604 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 TNFSF15O95150 251 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 VCLP18206 1134 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 MSH3P20585 1137 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 RPL10P27635 214 aaKnown RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 RBMS1P29558 406 aaKnown RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 MC4RP32245 332 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 MAGEA6P43360 314 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 PRLHRP49683 370 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 CDKN1CP49918 316 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 TMPRSS15P98073 1019 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 BIRC2Q13490 618 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 C16orf72Q14CZ0 275 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 SKIDA1Q1XH10 827 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 PLA2G4EQ3MJ16 856 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 MAP9Q49MG5 647 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 ZNF658BQ4V348 819 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 NKAIN2Q5VXU1 208 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 FAM83HQ6ZRV2 1179 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 ZNF761Q86XN6 746 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 RBM12BQ8IXT5 1001 aaKnown RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 PIANPQ8IYJ0 282 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 FBXO39Q8N4B4 442 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 ZNF248Q8NDW4 579 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 OR13J1Q8NGT2 312 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 OR2L2Q8NH16 312 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 OR10G6Q8NH81 332 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 HEXDCQ8WVB3 486 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 CRELD1Q96HD1 420 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 SGSM3Q96HU1 749 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 COPS8Q99627 209 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 CMKLR1Q99788 373 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 OSGEPL1Q9H4B0 414 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 STN1Q9H668 368 aaKnown RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 EPB41L5Q9HCM4 733 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 SLC40A1Q9NP59 571 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 POT1Q9NUX5 634 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 PIH1D1Q9NWS0 290 aaKnown RBP10.93□□□□□ -0.66
COL4A6-205ENST00000468338 CRLS1Q9UJA2 301 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 NEU2Q9Y3R4 380 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 SLC30A1Q9Y6M5 507 aa10.93□□□□□ -0.66
COL4A6-205ENST00000468338 C17orf113A0A1B0GUU1 675 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 HEATR9A2RTY3 570 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 PDZK1P1A8MUH7 402 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 CES2O00748 559 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 NVLO15381 856 aaKnown RBP10.92□□□□□ -0.66
COL4A6-205ENST00000468338 DUX1O43812 170 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 APRTP07741 180 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 ATP1B2P14415 290 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-205ENST00000468338 ADRA1DP25100 572 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 ACRV1P26436 265 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 AKT1P31749 480 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 FOXN2P32314 431 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 DRG2P55039 364 aaKnown RBP10.92□□□□□ -0.66
COL4A6-205ENST00000468338 PCBP4P57723 403 aaKnown RBP10.92□□□□□ -0.66
COL4A6-205ENST00000468338 CDK16Q00536 496 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 TLE3Q04726 772 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 CACNG1Q06432 222 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 LAMB3Q13751 1172 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 NFE2L1Q14494 772 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 FNBP1LQ5T0N5 605 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 TSTD2Q5T7W7 516 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 TTC27Q6P3X3 843 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 MICALCLQ6ZW33 695 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 ARHGAP22Q7Z5H3 698 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 SERPINA9Q86WD7 417 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 SLC35F6Q8N357 371 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 BEND7Q8N7W2 519 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-205ENST00000468338 DNAAF3Q8N9W5 541 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 ACTRT1Q8TDG2 376 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 MS4A14Q96JA4 679 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 ZNF778Q96MU6 729 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 TBC1D10AQ9BXI6 508 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 FAM96AQ9H5X1 160 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 OGFRQ9NZT2 677 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 TMEM9Q9P0T7 183 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 DMGDHQ9UI17 866 aaKnown RBP10.92□□□□□ -0.66
COL4A6-205ENST00000468338 ACSL5Q9ULC5 683 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 LOXL2Q9Y4K0 774 aa10.92□□□□□ -0.66
COL4A6-205ENST00000468338 BPTFQ12830 3046 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 MN1Q10571 1320 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-205ENST00000468338 PRAMEF33A0A0G2JMD5 474 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 CCDC162PA2VCL2 907 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 OR52A4PA6NMU1 304 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 E7EVH7 732 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 RRP8O43159 456 aaKnown RBP10.91□□□□□ -0.66
COL4A6-205ENST00000468338 VIPP01282 170 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 C9P02748 559 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 PRSS56P0CW18 603 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 RALBP11234 206 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 HGFP14210 728 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 ITIH1P19827 911 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 TPSB2P20231 275 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 MSNP26038 577 aaKnown RBP10.91□□□□□ -0.66
COL4A6-205ENST00000468338 ITPKBP27987 946 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 ETV5P41161 510 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 POU4F2Q12837 409 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 SEPT6Q14141 434 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms