RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MRPL48Q96GC5 212 aaKnown RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 RIOK2Q9BVS4 552 aaKnown RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 EPB41L4BQ9H329 900 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 ALG2Q9H553 416 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF395Q9H8N7 513 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 NLE1Q9NVX2 485 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF780BQ9Y6R6 833 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 MYH7BA7E2Y1 1941 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 ELOVL7A1L3X0 281 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 C9JVG2 144 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 RGS5O15539 181 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 TIPRLO75663 272 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 IMPDH2P12268 514 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 VIPR1P32241 457 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 ILF3Q12906 894 aaKnown RBP eCLIP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 HERC3Q15034 1050 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 CCDC157Q569K6 752 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 EMC10Q5UCC4 262 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 TMEM198Q66K66 360 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 C2orf73Q8N5S3 287 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 NPWQ8N729 165 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 KCNJ9Q92806 393 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 KIAA1191Q96A73 305 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 FEM1AQ9BSK4 669 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 DERL2Q9GZP9 239 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 GJD2Q9UKL4 321 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 RUVBL1Q9Y265 456 aaKnown RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 UPK3BL1B0FP48 263 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 BHMG1C9JSJ3 638 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 UPK3BL2E5RIL1 263 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 TMEM189-UBE2V1I3L0A0 370 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 VIPP01282 170 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 IL6P05231 212 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 CCNFP41002 786 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 C2orf80Q0P641 193 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 MPP2Q14168 576 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 RFTN2Q52LD8 501 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 CLDN19Q8N6F1 224 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 TSPAN14Q8NG11 270 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 REXO5Q96IC2 774 aaKnown RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 GAS2L1Q99501 681 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 PCBD2Q9H0N5 130 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 MAFFQ9ULX9 164 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 POMPQ9Y244 141 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 TEX28O15482 410 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 GSNP06396 782 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 UMPSP11172 480 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 PCLAFQ15004 111 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 EIF3MQ7L2H7 374 aaKnown RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 SFRP1Q8N474 314 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 IRF7Q92985 503 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 NUS1Q96E22 293 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 FCRL3Q96P31 734 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 MIPEPQ99797 713 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 C3orf14Q9HBI5 128 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 INTS7Q9NVH2 962 aaKnown RBP13.59□□□□□ -0.23
BRAT1-203ENST00000467558 CIDEBQ9UHD4 219 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 PHF24Q9UPV7 400 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 SLC31A1O15431 190 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 OR10H2O60403 315 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 LATS1O95835 1130 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 GPIP06744 558 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
BRAT1-203ENST00000467558 CAPZA2P47755 286 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 RPS14P62263 151 aaKnown RBP13.58□□□□□ -0.24
BRAT1-203ENST00000467558 GPAT3Q53EU6 434 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 CHST15Q7LFX5 561 aaPredicted RBP13.58□□□□□ -0.24
BRAT1-203ENST00000467558 LIX1Q8N485 282 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 ARFGAP1Q8N6T3 406 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 DDHD1Q8NEL9 900 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 ITM2CQ9NQX7 267 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 PNPLA3Q9NST1 481 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 GALPQ9UBC7 116 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 MRPS33Q9Y291 106 aaKnown RBP13.58□□□□□ -0.24
BRAT1-203ENST00000467558 GMPPBQ9Y5P6 360 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 BCL10O95999 233 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 ALDOAP04075 364 aaKnown RBP13.58□□□□□ -0.24
BRAT1-203ENST00000467558 CBSLP0DN79 551 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 UQCRBP14927 111 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 CBSP35520 551 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 CDC42P60953 191 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 RAB33AQ14088 237 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 LRRC66Q68CR7 880 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 HDDC3Q8N4P3 179 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 C3orf58Q8NDZ4 430 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 OR52B2Q96RD2 323 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 TXLNGYQ9BZA5 131 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 POPDC3Q9HBV1 291 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 PAPOLBQ9NRJ5 636 aaKnown RBP13.58□□□□□ -0.24
BRAT1-203ENST00000467558 CDC7O00311 574 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 ABLIM1O14639 778 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 FPGTO14772 594 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 GRSF1Q12849 480 aaKnown RBP eCLIP13.58□□□□□ -0.24
BRAT1-203ENST00000467558 DPY19L1Q2PZI1 675 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 LPCAT4Q643R3 524 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 SLC47A1Q96FL8 570 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 WDR6Q9NNW5 1121 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms