RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ERAP2Q6P179 960 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 ADAMTSL2Q86TH1 951 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 LGI2Q8N0V4 545 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 KDM1BQ8NB78 822 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 KLHDC9Q8NEP7 349 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 HMGCLL1Q8TB92 370 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 GIPC2Q8TF65 315 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 ANKRD49Q8WVL7 239 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 PROX1Q92786 737 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 MYEOVQ96EZ4 313 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 ZNF717Q9BY31 904 aaPredicted RBP17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 ASPSCR1Q9BZE9 553 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 MKRN2Q9H000 416 aaKnown RBP17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 TRIM39Q9HCM9 518 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 DIABLOQ9NR28 239 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 TREX1Q9NSU2 369 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 CRYL1Q9Y2S2 319 aa17.82■□□□□ 0.44
SNAPC3-205ENST00000467062 TBX1O43435 398 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 GFAPP14136 432 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 SPNP16150 400 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 CTRB1P17538 263 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 S100A5P33763 92 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 GP2P55259 537 aaKnown RBP17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 GEN1Q17RS7 908 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 CTRB2Q6GPI1 263 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 SLC22A17Q8WUG5 538 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 IGSF8Q969P0 613 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 HOPXQ9BPY8 73 aaPredicted RBP17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 C12orf4Q9NQ89 552 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 ENTPD7Q9NQZ7 604 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 HCSTQ9UBK5 93 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 MANSC4A6NHS7 340 aaPredicted RBP17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 HAT1O14929 419 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 ADAMTS4O75173 837 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 PEX11BO96011 259 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 HSD17B1P14061 328 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 OXTRP30559 389 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 PRKCZQ05513 592 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 IRF5Q13568 498 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 CCBE1Q6UXH8 406 aaPredicted RBP17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 UTS2BQ765I0 119 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 PIM3Q86V86 326 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 AIFM2Q9BRQ8 373 aa17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 GMPR2Q9P2T1 348 aaKnown RBP17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 WBP11Q9Y2W2 641 aaKnown RBP17.81■□□□□ 0.44
SNAPC3-205ENST00000467062 SNTNA6NMZ2 147 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 FGF10O15520 208 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 INMTO95050 263 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 CPB1P15086 417 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 KCNC1P48547 511 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 PPP1R3AQ16821 1122 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 CYP51A1Q16850 503 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 ZIK1Q3SY52 487 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 RAP1GAP2Q684P5 730 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 PRSS48Q7RTY5 328 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 CNTN4Q8IWV2 1026 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 C2CD4AQ8NCU7 369 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 IL17RDQ8NFM7 739 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 KCTD14Q9BQ13 255 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 IL37Q9NZH6 218 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 EGFL7Q9UHF1 273 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 ANKRD6Q9Y2G4 727 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 SLC4A1P02730 911 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 HOXC13P31276 330 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 PBX3P40426 434 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 TPD52P55327 224 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 UGP2Q16851 508 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 MS4A13Q5J8X5 152 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 C6orf141Q5SZD1 244 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 SGCDQ92629 289 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 EXT2Q93063 718 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 ZFYVE19Q96K21 471 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 UBXN10Q96LJ8 280 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 NODALQ96S42 347 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 BDH2Q9BUT1 245 aa17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 MARCH4Q9P2E8 410 aaPredicted RBP17.8■□□□□ 0.44
SNAPC3-205ENST00000467062 ATP6AP2A0A1C7CYW4 349 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 NME4O00746 187 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 PSMD3O43242 534 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 ATP6AP2O75787 350 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 MYCP01106 439 aaPredicted RBP17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 APOA1P02647 267 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 HTR1AP08908 422 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 FXNQ16595 210 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 DPY19L1Q2PZI1 675 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 CLLU1OSQ5K130 101 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 MFSD14CQ5VZR4 134 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 TTC23Q5W5X9 447 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 PRR23BQ6ZRT6 265 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 RYBPQ8N488 228 aaPredicted RBP17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 FAM109AQ8N4B1 249 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 SPPL2BQ8TCT7 592 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 ATP13A2Q9NQ11 1180 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 RPRD1BQ9NQG5 326 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 AASDHPPTQ9NRN7 309 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 IGSF5Q9NSI5 407 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 NSMCE4AQ9NXX6 385 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 ABCD2Q9UBJ2 740 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 ZBBXA8MT70 800 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 H0Y858 1186 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms